DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1139 and AVT4

DIOPT Version :9

Sequence 1:NP_647686.1 Gene:CG1139 / 38264 FlyBaseID:FBgn0035300 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_014298.1 Gene:AVT4 / 855622 SGDID:S000005045 Length:713 Species:Saccharomyces cerevisiae


Alignment Length:456 Identity:116/456 - (25%)
Similarity:201/456 - (44%) Gaps:85/456 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 KNPTTNFQTFAHFLKASVGTGVLAMPSAFAHAGYVNGTLLTLIIGSLALYCLHILIKCMYILCKR 104
            |..|:..:.|...||:.:|||||.:|:||.:.|......:....|..:.:|.:||::.      :
Yeast   294 KGTTSTKKVFLILLKSFIGTGVLFLPNAFHNGGLFFSVSMLAFFGIYSYWCYYILVQA------K 352

  Fly   105 QRVPYVSFSQAMNLGLKQGPPWLRCLAPIAVPFVDGFLAFYHFGICCVYVVFIAESIKQLVD--- 166
            ......||.   ::|||...||:|.:...:       |.....|....|::|.|::::..:|   
Yeast   353 SSCGVSSFG---DIGLKLYGPWMRIIILFS-------LVITQVGFSGAYMIFTAKNLQAFLDNVF 407

  Fly   167 -------EYLVVWDVRIHMCIIIVPLLLIYSIKNLKLLAPFSSAANLLLLVGFGIILYYIFEEL- 223
                   .||:|:..     ||.:||..|.:|..|.|  | |..||..::.|..|::.:..:.| 
Yeast   408 HVGVLPLSYLMVFQT-----IIFIPLSFIRNISKLSL--P-SLLANFFIMAGLVIVIIFTAKRLF 464

  Fly   224 -----PPLSERDPFVAAGKLPTFFGTVLFALEAVGVILAIEENMATPKSFVGPCGILNSGMSIVL 283
                 .|.......:.|.:...|.||.:||.|.:|:|:.::::|..|:.|           .:||
Yeast   465 FDLMGTPAMGVVYGLNADRWTLFIGTAIFAFEGIGLIIPVQDSMRNPEKF-----------PLVL 518

  Fly   284 GLYVL--------LGFFGYWKYGNESEGSITLNIPQSEIPAQVVKVFFAITTWISYALQGYVTAH 340
            .|.:|        :...||..||:..:..|.||:|||.|...::::|::|...:|..||.:....
Yeast   519 ALVILTATILFISIATLGYLAYGSNVQTVILLNLPQSNIFVNLIQLFYSIAIMLSTPLQLFPAIK 583

  Fly   341 ILWDKYLAKRFK------------ETRQTFYEL---------IFRAIIVLLTFGCAVAIPD-LSV 383
            |:.:|:..|..|            |.|....:|         ..|:|||::....|....| |..
Yeast   584 IIENKFFPKFTKIYVKHDDLTTRVELRPNSGKLNWKIKWLKNFIRSIIVIIVVSIAYFGSDNLDK 648

  Fly   384 FLSLVGSFCLSILGLIFPVLLQI---CVQYTEGYGPFRIKLIINLLLLCFGIFGGVVGTYVSILD 445
            |:|::||.....|..|:|.:|.:   .:..|:|.. :|.|.:::.:|:.|||...:..:|.||..
Yeast   649 FVSVIGSLACIPLVYIYPSMLHLRGNSLPETKGEF-WRFKPMLDTILIFFGIASMLYTSYQSIFG 712

  Fly   446 I 446
            :
Yeast   713 V 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1139NP_647686.1 SdaC 36..404 CDD:223884 104/409 (25%)
SLC5-6-like_sbd 42..444 CDD:294310 114/450 (25%)
AVT4NP_014298.1 Aa_trans 295..711 CDD:279788 114/451 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 151 1.000 Domainoid score I928
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 153 1.000 Inparanoid score I1099
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 1 1.000 - - mtm9188
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X121
TreeFam 00.000 Not matched by this tool.
87.860

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