DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1139 and AVT1

DIOPT Version :9

Sequence 1:NP_647686.1 Gene:CG1139 / 38264 FlyBaseID:FBgn0035300 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_012534.1 Gene:AVT1 / 853457 SGDID:S000003761 Length:602 Species:Saccharomyces cerevisiae


Alignment Length:465 Identity:88/465 - (18%)
Similarity:170/465 - (36%) Gaps:133/465 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LKNPTTNFQTFAHFLKASVGTGVLAMPSAFAHAGYVNGTLLTLIIGSLALYCLHILIKCMYILCK 103
            |...:|..||..:.:...:|.|:||:|....:||:|.| |..|.|.:||.:|...|:.       
Yeast   204 LAGQSTAPQTIFNSINVLIGIGLLALPLGLKYAGWVIG-LTMLAIFALATFCTAELLS------- 260

  Fly   104 RQRVPYVSFSQAMNLGLKQGPPWLRCL--APIAVPFVD-GFLAFYHFGICCV------------- 152
                                    |||  .|..:.:.| |:.||...|...:             
Yeast   261 ------------------------RCLDTDPTLISYADLGYAAFGTKGRALISALFTLDLLGSGV 301

  Fly   153 -YVVFIAESIKQLVDEYLVVWDVRIHMCIIIVPLLLIYSI-KNLKLLAPFSSAANLLLLVGFGII 215
             .|:...:|:..|..:|...:...:...|:..|:.:..|: .|:.||...|:...:|::...|  
Yeast   302 SLVILFGDSLNALFPQYSTTFFKIVSFFIVTPPVFIPLSVLSNISLLGILSTTGTVLVICCCG-- 364

  Fly   216 LYYIFEELPPLSERDPFVAAGKLPTFFGTVLFALE------AVGVILA----------IEENMAT 264
               :::...|          |.|.....|.::.::      ::|::.|          ::.:|..
Yeast   365 ---LYKSSSP----------GSLVNPMETSMWPIDLKHLCLSIGLLSACWGGHAVFPNLKTDMRH 416

  Fly   265 PKSFVGPC--------GILNSGMSIVLGLYVLLGFFGYWKYGNESEGSITLNIPQSE-IPAQVVK 320
            |..| ..|        .:.:.|.:::          |:..:||..:..||.|:..:| .|..|..
Yeast   417 PDKF-KDCLKTTYKITSVTDIGTAVI----------GFLMFGNLVKDEITKNVLLTEGYPKFVYG 470

  Fly   321 VFFAITTWISYA---LQGYVTAHILWD------------KYLAKRFKETRQTFYELIFRAIIVLL 370
            :..|:.|.|..|   |.......:| |            ..:.:|..:..|.|..:....:.||:
Yeast   471 LISALMTIIPIAKTPLNARPIVSVL-DVLMNVQHIDEAASAIKRRAAKGLQVFNRIFINVVFVLI 534

  Fly   371 TFGCAVAIPDLSVFLSLVGS-FCLSILGLIFP--VLLQICVQYTEGYGPF-----RIKLIINLLL 427
                |:..|:....::.:|: .|.:|. ||.|  ..|::|....:   |:     .:.:.|:::|
Yeast   535 ----AINFPEFDKIIAFLGAGLCFTIC-LILPCWFYLRLCKTTIK---PWERVACHVTICISVVL 591

  Fly   428 LCFGIFGGVV 437
            ...|:...::
Yeast   592 STLGVGAAII 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1139NP_647686.1 SdaC 36..404 CDD:223884 82/425 (19%)
SLC5-6-like_sbd 42..444 CDD:294310 87/462 (19%)
AVT1NP_012534.1 Aa_trans 206..601 CDD:279788 87/461 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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