DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment acs and AT4G38250

DIOPT Version :10

Sequence 1:NP_647686.1 Gene:acs / 38264 FlyBaseID:FBgn0035300 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_195538.1 Gene:AT4G38250 / 829982 AraportID:AT4G38250 Length:436 Species:Arabidopsis thaliana


Alignment Length:439 Identity:112/439 - (25%)
Similarity:198/439 - (45%) Gaps:62/439 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 KNP--TTNFQTFAHFLKASVGTGVLAMPSAFAHAGYVNGTLLTLIIGSLALYCLHILIKCMYILC 102
            |.|  ::.|:|||:...|.||.|||.:|.||...|::.|.||.:.:..|..:|:      |.::.
plant    29 KGPPLSSQFKTFANVFIAVVGAGVLGLPYAFKRTGWLMGVLLLVSVSVLTHHCM------MLLVY 87

  Fly   103 KRQRVPYVSFSQAMNLGLKQ----GPPWLRCLAPIAVPFVDGFLAFYHFGICCVYVVFIAESIKQ 163
            .|:::      .:.|.|:.:    |.........:....||.|:.....|.|..|::||..::..
plant    88 TRRKL------DSFNAGISKIGSFGDLGFAVCGSLGRIVVDLFIILSQAGFCVGYLIFIGTTLAN 146

  Fly   164 LVD----------------EYLVVWDVRIHM--CIIIVPLLL-IYSIKNLKLLAPFSSAANLLLL 209
            |.|                |:|.|....:::  |.   |..| :.|||.|..|||.|..|:::.|
plant   147 LSDPESPTSLRHQFTRLGSEFLGVSSKSLYIWGCF---PFQLGLNSIKTLTHLAPLSIFADIVDL 208

  Fly   210 VGFGIILYYIFEELPPLSERDPFVAAGKLPTF---FGTVLFALEAVGVILAIEENMATPKSFVGP 271
            ....:::  :.:.:..|.:|...||.|.:..|   .|..:::.|.||::|.:|..|.....|   
plant   209 GAMAVVI--VEDSMIILKQRPDVVAFGGMSLFLYGMGVAVYSFEGVGMVLPLESEMKDKDKF--- 268

  Fly   272 CG-ILNSGMSIVLGLYVLLGFFGYWKYGNESEGSITLNIPQSEIPAQVVKVFFAITTWISYALQG 335
             | :|..||..:..:|:..|..||..:|.::...||.|: .:.:.:.||::...|..:.::.|..
plant   269 -GKVLALGMGFISLIYIAFGILGYLAFGEDTMDIITANL-GAGLVSTVVQLGLCINLFFTFPLMM 331

  Fly   336 YVTAHILWDKYLAKRFKETRQTFYELIFRAIIVLLTFGCAVAIPDLSVFLSLVGSFCLSILGLIF 400
            .....|     :.:||.   :..|....|.::||.....|:.:|:.:.|||||||....:||.:.
plant   332 NPVFEI-----VERRFS---RGMYSAWLRWVLVLAVTLVALFVPNFADFLSLVGSSTCCVLGFVL 388

  Fly   401 PVLLQICVQYTEGYGPFRIKLIINLLLLCFGIFGGVVGTYVSILDIIAV 449
            |.|..:.| :.|..|  .::...:..::..|:...|.||:.|:.:|.:|
plant   389 PALFHLLV-FKEEMG--WLQWSSDTAIVVLGVVLAVSGTWSSLSEIFSV 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acsNP_647686.1 SLC5-6-like_sbd 42..444 CDD:444915 109/430 (25%)
AT4G38250NP_195538.1 SLC5-6-like_sbd 34..429 CDD:444915 108/427 (25%)

Return to query results.
Submit another query.