DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1139 and Slc38a2

DIOPT Version :9

Sequence 1:NP_647686.1 Gene:CG1139 / 38264 FlyBaseID:FBgn0035300 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_780330.2 Gene:Slc38a2 / 67760 MGIID:1915010 Length:504 Species:Mus musculus


Alignment Length:491 Identity:103/491 - (20%)
Similarity:182/491 - (37%) Gaps:112/491 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 PTKSA--NGSNDDYDPHQHRELKNP--------------TTNF-QTFAHFLKASVGTGVLAMPSA 67
            |||.|  .....|.||.....|...              ||:| .:..:...|.||:|:|.:..|
Mouse    31 PTKQAALKSHYADVDPENQNFLLESNLGKKKYETDFHPGTTSFGMSVFNLSNAIVGSGILGLSYA 95

  Fly    68 FAHAGYVNGTLLTLIIGSLALYCLHILIK-------CMYILCKRQRVPYVSFSQAMNLGLKQGPP 125
            .|:.|.....:|...:...:||.:|:|:|       .:|     :::.:.::..|..|.      
Mouse    96 MANTGIALFIILLTFVSIFSLYSVHLLLKTANEGGSLLY-----EQLGHKAYGLAGKLA------ 149

  Fly   126 WLRCLAPIAVPFVDGFLAFYHFGICCVYVVFIAESIKQLVDEYLV-------VWDVRIHMCIIIV 183
                        ..|.:...:.|....| :||.:....||.:.|:       :|.:.....:::|
Mouse   150 ------------ASGSITMQNIGAMSSY-LFIVKYELPLVIKALMNIEDTNGLWYLNGDYLVLLV 201

  Fly   184 PLLLIYS---IKNLKLLAPFSSAANLLLLVGFGIILYYIFEELP-PL--------SERDPFVAAG 236
            .|:||..   ::||..|. ::|..:||.::.|.|::.....::| |:        :....|..|.
Mouse   202 SLVLILPLSLLRNLGYLG-YTSGLSLLCMIFFLIVVICKKFQIPCPVEAALVANETVNGTFTQAA 265

  Fly   237 KLPTFFGT----------------------VLFALEAVGVILAIEENMATPKSFVGPCGILNSGM 279
            ....|..|                      :.|:......:|.|.|.:.: :|......:.....
Mouse   266 LALAFNSTADDACRPRYFIFNSQTVYAVPILTFSFVCHPAVLPIYEELKS-RSRRRMMNVSKISF 329

  Fly   280 SIVLGLYVLLGFFGYWK-YGN-ESEGSITLN-IPQSEIPAQVVK--VFFAITTWIS---YALQGY 336
            ..:..:|:|...|||.. ||: |||...|.: |..::|...||:  |..|:|..:.   :.::..
Mouse   330 FAMFLMYLLAALFGYLTFYGHVESELLHTYSEIVGTDILLLVVRLAVLVAVTLTVPVVIFPIRSS 394

  Fly   337 VTAHILWDKYLAKRFKETRQTFYELIFRAIIVLLTFGCAVAIPDLSVFLSLVGSFCLSILGLIFP 401
            || |:|..   .|.|...|.:    |....|:..|....:.:|.:......:|:...::|..|.|
Mouse   395 VT-HLLCP---TKEFSWLRHS----IITVTILSFTNLLVIFVPTIRDIFGFIGASAAAMLIFILP 451

  Fly   402 VLLQICVQYTEGYGPFRIKLIINLLLLCFGIFGGVV 437
            ....|.:...|   |.|  .:..:..|||.:.|.||
Mouse   452 SAFYIKLVKKE---PMR--SVQKIGALCFLLSGIVV 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1139NP_647686.1 SdaC 36..404 CDD:223884 86/438 (20%)
SLC5-6-like_sbd 42..444 CDD:294310 95/467 (20%)
Slc38a2NP_780330.2 Regulates protein turnover upon amino acid deprivation. /evidence=ECO:0000250 1..96 16/64 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
SLC5-6-like_sbd 69..491 CDD:382020 95/453 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849029
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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