DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1139 and slc38a4

DIOPT Version :9

Sequence 1:NP_647686.1 Gene:CG1139 / 38264 FlyBaseID:FBgn0035300 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_001005944.2 Gene:slc38a4 / 449771 ZFINID:ZDB-GENE-041010-14 Length:538 Species:Danio rerio


Alignment Length:539 Identity:93/539 - (17%)
Similarity:177/539 - (32%) Gaps:193/539 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 NDDYDPHQHRELKNPTTNFQTFAHFLKASVGTGVLAMPSAFAHAGYVNGTLLTLIIGSLALYCLH 92
            |::|.| .|........|..      .|.:|:|:|.:..|.|:.|.:...:|.|.:..|:||.:|
Zfish    64 NEEYHP-GHASFGMSVFNLS------NAIMGSGILGLSFAMANTGIILFVILLLGVAILSLYSVH 121

  Fly    93 ILIKCMYILCKR------QRVPYVSFSQAMNLGLKQGPPWLRCLAPIAVPFVDGFLAFYHFGICC 151
            :|:    :..|.      :::...:|.            |...:|..      |.:...:.|...
Zfish   122 LLL----VTAKEGGSLIYEKLGERAFG------------WPGKMAAF------GSITLQNIGAMS 164

  Fly   152 VYVVFIAESIKQLVDEYLVV------WDVRIHMCIIIVPLLLIYS---IKNLKLLAPFSSAANLL 207
            .|:..:...:.:::..:|.:      |.:..:..:::|.:.:|..   :|||..|. ::|..:|.
Zfish   165 SYLFIVKYELPEVIRAFLGLEESSGEWYLNGNYVVVLVSIGIILPLSLLKNLGYLG-YTSGFSLS 228

  Fly   208 LLVGF-GIILYYIFEELPPLSERDPFVAAGKLPTFF------------GTVLFALEAVGVILAIE 259
            .:|.| |:::|            ...:....||.||            ...|:.|.....:..:.
Zfish   229 CMVFFLGVLIY------------KKTILPCPLPFFFEHGSNVSINGSDAIALYGLHNASALAYMS 281

  Fly   260 E--------------------------NMATPK---------------SFVGPC----------- 272
            |                          :|.|||               :|...|           
Zfish   282 ETAANAVDPHTPLHDSVQFSAHPEDHQDMCTPKYFIFNSQTVYTVPILAFAFVCHPEVLPIYSEL 346

  Fly   273 ---------GILNSGMSIVLGLYVLLGFFGYWKYGNESEG------------------------- 303
                     .:.|..:..:|.:|:|...|||..:.:..|.                         
Zfish   347 KNRSRRRMQSVSNLSILAMLVMYLLSALFGYLTFYDHVEAELLHTFTKVYKFDTMLLMVRLAVLT 411

  Fly   304 SITLNIPQSEIP--AQVVKVFFA--ITTWISYALQGYVTAHILWDKYLAKRFKETRQTFYELIFR 364
            ::||.:|....|  :.|:.:.||  ..:||.:.|   :.|.|                   |.|.
Zfish   412 AVTLTVPIVLFPIRSSVITLCFAGKEFSWIRHFL---IAAAI-------------------LAFN 454

  Fly   365 AIIVLLTFGCAVAIPDLSVFLSLVGSFCLSILGLIFPVLLQI-CVQYTEGYGPFRIKLIINLLLL 428
            .::|:.       :|.:......:||...::|..|.|....: .|:......|.:|..:|.|:: 
Zfish   455 NLLVIF-------VPTIRDIFGFIGSSAATMLIFILPAAFYLRLVKSLPMKSPQKISALIFLVV- 511

  Fly   429 CFGIFGGVVGTYVSILDII 447
              |||..:....:.:||.|
Zfish   512 --GIFFMIGSLSLIVLDWI 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1139NP_647686.1 SdaC 36..404 CDD:223884 79/485 (16%)
SLC5-6-like_sbd 42..444 CDD:294310 86/520 (17%)
slc38a4NP_001005944.2 DUF4404 3..90 CDD:291055 7/32 (22%)
SdaC 68..520 CDD:223884 88/525 (17%)
SLC5-6-like_sbd 72..525 CDD:294310 86/525 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594576
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

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