DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1139 and Slc38a9

DIOPT Version :9

Sequence 1:NP_647686.1 Gene:CG1139 / 38264 FlyBaseID:FBgn0035300 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_001030328.1 Gene:Slc38a9 / 310091 RGDID:1311881 Length:559 Species:Rattus norvegicus


Alignment Length:563 Identity:105/563 - (18%)
Similarity:183/563 - (32%) Gaps:192/563 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNDDIKTVTVYPTTL--------ELTTPTKSANGSNDDYDPHQHR-----------ELKNPT--- 43
            :||.|:.|:.:...:        .||||...|..:.|...|....           :||:.|   
  Rat    49 VNDVIQKVSDHAAAMNKRIHYYSRLTTPADKALIAPDHVVPAPEECYVYSPLGSAYKLKSYTEGY 113

  Fly    44 ---TNFQTFAHFLKASVGTGVLAMPSAFAHAGYVNGTLLTLIIGSLALYCLHILIKCMYIL---- 101
               |:..|........:||.:|::|.....||:..|..:.:::|.|.|||.:.::|...::    
  Rat   114 RKNTSLVTIFMIWNTMMGTSILSIPWGIKQAGFTTGMCVIVLMGLLTLYCCYRVVKSRSMIVTSD 178

  Fly   102 ---------CKRQRVPYVSFSQAMNLGLKQGPPWLRCLAPIAVPFVDGFLAFYHFGICCVYVVFI 157
                     ||..   :.||.|           |...|.                          
  Rat   179 TTTWEYPDVCKHY---FGSFGQ-----------WSSLLF-------------------------- 203

  Fly   158 AESIKQLVDEYLVVWDVRIHMCIIIVPLL---------LIYSIKNL-KLLAPFSSAANLLLLVGF 212
              |:..|:...:|.|       :::...|         .|:.|.:. .:|:..:|:..:....|.
  Rat   204 --SLVSLIGAMIVYW-------VLMSNFLFNTGKFIFNFIHHINDTDTVLSTNNSSPVICPSAGS 259

  Fly   213 G-----IILYY-------IFEELPPLSERDPFVAAG--------KLPTFF------GTV------ 245
            |     .:::|       :||.....|:..||...|        |.|:||      |||      
  Rat   260 GHPDNSSMIFYNSDTEVRLFERWWDKSKTVPFYLIGLLLPLLNFKSPSFFSKFNILGTVSVLYLI 324

  Fly   246 -LFALEAVGVILAIEENMATPKSFVGP---------CGILNSGMSI------------------- 281
             :..|:|:.:...:|.:...|..|..|         .|:|.....|                   
  Rat   325 FIVTLKAIRLGFHLEFHWFAPTEFFVPEIRAQFPQLTGVLTLAFFIHNCIITLLKNNKNQENNVR 389

  Fly   282 --------VLGLYVLLGFFGYWKYGNES------EGSITLNIPQSEIPAQVVKVFFAITTWISYA 332
                    |...|:.:|...:..:.:..      |.:...|.|.|:..:.:.::.........|.
  Rat   390 DLCIAYMLVTLTYLYIGVLVFASFPSPPLPKDCIEQNFLDNFPSSDTLSFIARICLLFQMMTVYP 454

  Fly   333 LQGYVT-----AHILWDKYLAKRFKETRQTFYELIFRAIIVLLTFGCAVAIPDLSVFLSLVGSFC 392
            |.||:.     .||..|.|        ...|:.||...|||......|...|::...:...|:.|
  Rat   455 LLGYLARVQLLGHIFGDIY--------PSIFHVLILNLIIVGAGVTMACFYPNIGGIIRYSGAAC 511

  Fly   393 LSILGLIFPVLLQICVQYTEGYGPFRI---KLIINLLLLCFGI 432
            ......|:|.|:.|..|:.|.    |:   ||:.:::::..|:
  Rat   512 GLAFVFIYPSLIYILSQHQEE----RLTWPKLVFHIIIIILGL 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1139NP_647686.1 SdaC 36..404 CDD:223884 86/487 (18%)
SLC5-6-like_sbd 42..444 CDD:294310 92/503 (18%)
Slc38a9NP_001030328.1 SLC5-6-like_sbd 114..555 CDD:382020 91/498 (18%)
Important for arginine binding and amino acid transport. /evidence=ECO:0000250|UniProtKB:Q08BA4 128..133 1/4 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352647
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

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