DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1139 and Slc38a6

DIOPT Version :9

Sequence 1:NP_647686.1 Gene:CG1139 / 38264 FlyBaseID:FBgn0035300 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_001013117.1 Gene:Slc38a6 / 299139 RGDID:1310330 Length:457 Species:Rattus norvegicus


Alignment Length:494 Identity:87/494 - (17%)
Similarity:178/494 - (36%) Gaps:144/494 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DDYDPHQHRELKNPTTNFQTFA----HFLKASVGTGVLAMPSAFAHAGYVNGTLLTLIIGSLALY 89
            :::.|....|.:...::..:|.    :.:.|.:|:|:|.:....|:.|.:..:.|.|::..||.|
  Rat    28 EEWSPLLSNEPRRQGSSGASFGLSVFNVMNAIMGSGILGLAYVMANTGILGFSFLLLLVALLASY 92

  Fly    90 CLHILI-KCMYILCKRQRVPYVSFSQAMNLGLKQGPPWLRCLAPIAVP---FVDGFLAFYHFGIC 150
            .:|:|: .|:          :.:.:...:||          |....:|   .|.|.:...:.|..
  Rat    93 SVHLLLAMCI----------HTAVTSYEDLG----------LFAFGLPGKVVVAGTIIIQNIGAM 137

  Fly   151 CVYVVFIAESIKQLVDEYLV-----VWDVRIHMCIIIVPLLLIYSIKNLKLLA--PFSSAANLLL 208
            ..|::.|...:...:.|.|.     .|.:...|.:||:.:.:::.:..|..:.  .::|:.:...
  Rat   138 SSYLLIIKTELPAAISEVLPSDHSGAWYLDGQMLLIIICVGIVFPLSLLPKIGFLGYTSSLSFFF 202

  Fly   209 LVGFGIILYY----------------IFEELPPLSERDPFVAAGKLPTFFGTVLFALEAVGV--- 254
            :|.|.:::..                :|:......:..|     ||..|....::|:..:..   
  Rat   203 MVFFALVVVIKKWAVPCPLTLNCINAVFQISNATDDCKP-----KLFHFSKESVYAIPTMAFSFL 262

  Fly   255 ----ILAIEENMATPKSFVGPCGILNSGMSIVLGLYVLLGFFGYWKYGNESEG------------ 303
                :|.|...:.:| |......:.|:.:::...:|.:...|||..:.::.|.            
  Rat   263 CHTSVLPIYCELRSP-SKKRMQNVTNTAIALSFLVYFVSALFGYLTFYDKVESELLQGYSKYLPH 326

  Fly   304 -------------SITLNIPQSEIPAQVVKVFFAITTWISYALQGYVTAHILWDKYLAKRFKETR 355
                         ::.|.:|....||:...:.                  ||:..|   .|...|
  Rat   327 DAAVMAVKLCILFAVLLTVPLIHFPARKALMM------------------ILFSNY---PFSWIR 370

  Fly   356 QTFYELIFRAIIVLLTFGCAVAIPDLSVFLSLVGSFCLSILGLIFPVLLQICVQYTEGYGPFRIK 420
            .:...|....|||||    |:.:||:.....:||:...:.|..:||             |.|.:|
  Rat   371 HSLTTLALNIIIVLL----AIYVPDIRNVFGVVGASTSTCLIFVFP-------------GLFYLK 418

  Fly   421 L------------IINLLLLCFGIFGGVVGTYVSILDII 447
            |            .::||..     |.|||::..:|.|:
  Rat   419 LSREDFLSWKKLGALSLLST-----GTVVGSFSLVLIIL 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1139NP_647686.1 SdaC 36..404 CDD:223884 74/430 (17%)
SLC5-6-like_sbd 42..444 CDD:294310 83/476 (17%)
Slc38a6NP_001013117.1 SLC5-6-like_sbd 45..452 CDD:294310 84/475 (18%)
SdaC 45..447 CDD:223884 83/470 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352560
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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