DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1139 and slc-36.1

DIOPT Version :9

Sequence 1:NP_647686.1 Gene:CG1139 / 38264 FlyBaseID:FBgn0035300 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_499743.2 Gene:slc-36.1 / 259544 WormBaseID:WBGene00012804 Length:455 Species:Caenorhabditis elegans


Alignment Length:451 Identity:149/451 - (33%)
Similarity:246/451 - (54%) Gaps:27/451 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PTTLELTTPTKSANGSNDDYDPHQHR-ELKNPTTNFQTFAHFLKASVGTGVLAMPSAFAHAGYVN 75
            |...|:.||.:  |..::|....|.| ..:|..|..|.|.|.:||.:|||:|::|.||.|:|...
 Worm    19 PGDTEVQTPRR--NTVSEDTSLFQDRLPTENSLTPEQAFIHMVKAMLGTGLLSLPLAFKHSGLFL 81

  Fly    76 GTLLTLIIGSLALYCLHILIKCMYILCKRQRVPYVSFSQAMNLGLKQGPPWLRCLAPIAVPFVDG 140
            |.:||::|..:.|||:..::...:.:|.|.....:.::..|...::.||||::.........|:.
 Worm    82 GLILTVLICLICLYCMRQVVFAAHFVCNRNGRDLIDYANIMRGAVEMGPPWIKRNGYFFKQLVNV 146

  Fly   141 FLAFYHFGICCVYVVFIAESIKQLVDEYL------VVWDVRIHMCIIIVPLLLIYSIKNLKLLAP 199
            .:.....|.||||.||:|::::...:...      .||     |.::::|:|.|.||:.|.:|||
 Worm   147 NMFISQLGFCCVYFVFMADNLEDFFNNNTSIHLSKAVW-----MLLLLIPMLSICSIRRLSILAP 206

  Fly   200 FSSAANLLLLVGFGIILYYIFEELPPLSERDPFVAAGKLPTFFGTVLFALEAVGVILAIEENMAT 264
            |:.|||::.:|...::|::...:|.|:|....|..|..||.|||||:||.|.|.||:.||..|.:
 Worm   207 FAMAANVVYVVAVAVVLFFFLSDLRPISSLPWFGKATDLPLFFGTVMFAFEGVAVIMPIENRMQS 271

  Fly   265 PKSFVGPCGILNSGMSIVLGLYVLLGFFGYWKYGNESEGSITLNIPQSEIPAQVVKVFFAITTWI 329
            |.:|:...|:|||...:||.::.:.||:||...||:.:.:.|||:|.:.. .|.:|:.|.....|
 Worm   272 PHAFISWNGVLNSSCLVVLAIFSVTGFYGYLSLGNDVKDTATLNLPMTPF-YQTIKLMFVACIMI 335

  Fly   330 SYALQGYVTAHILWDKYLAKRFKETRQTFYELIFRAIIVLLTFGCAVA--IPDLSVFLSLVGSFC 392
            ||.||.||....: :|::.::....:||.|..|.|...|:||  ||:|  ||.|::|:||:|:|.
 Worm   336 SYPLQFYVPMERI-EKWITRKIPVDKQTLYIYIARYSGVILT--CAIAELIPHLALFISLIGAFS 397

  Fly   393 LSILGLIFPVLLQICVQYTEGYGPFRIKL---IINLLLLCFGIFGGVVGTYVSILDIIAVY 450
            .:.:.|:||.    |::....|....:..   |.|::||.|...|...|||.::::|...:
 Worm   398 GASMALLFPP----CIELLTSYAKNELSTGLWIKNIVLLTFAFIGFTTGTYSALIEIAKTF 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1139NP_647686.1 SdaC 36..404 CDD:223884 130/376 (35%)
SLC5-6-like_sbd 42..444 CDD:294310 139/412 (34%)
slc-36.1NP_499743.2 SLC5-6-like_sbd 50..445 CDD:382020 138/407 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166170
Domainoid 1 1.000 277 1.000 Domainoid score I909
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 282 1.000 Inparanoid score I1740
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 1 1.010 - - D284074at33208
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 1 1.000 - - mtm4749
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X121
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.910

Return to query results.
Submit another query.