DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1139 and R02F2.8

DIOPT Version :9

Sequence 1:NP_647686.1 Gene:CG1139 / 38264 FlyBaseID:FBgn0035300 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_498173.1 Gene:R02F2.8 / 187530 WormBaseID:WBGene00019837 Length:494 Species:Caenorhabditis elegans


Alignment Length:467 Identity:91/467 - (19%)
Similarity:170/467 - (36%) Gaps:136/467 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 SVGTGVLAMPSAFAHAGYVNGTLLTLIIGSLALYCLHILIKCMYILCKRQ-------RVPYVSFS 113
            :.|.|::|:..|....|.:.|.:|..:....:||....|.....|:..|.       |.||...:
 Worm    37 TAGGGMIALSYALTSMGLIPGLILLSLCSIFSLYTALELCWTWKIMQNRWPEYRDHCRKPYGEMA 101

  Fly   114 QAMNLGLKQGPPWLRCLAPIAVPFVDGFLAFY----HFGICCVYVVFIAESIKQLVDEYLVVWDV 174
            . ..:|.|                :..|:||.    ..|...|.|:..|:::..|:..:   :.:
 Worm   102 Y-RTIGRK----------------MRSFIAFMICITQIGFATVLVLLAAKNLSILLHFF---FSL 146

  Fly   175 RIHMCIIIV-------PLLLIYSIKNLKLLAPFSSAAN----LLLLVGFGIILYYIFEELPPLSE 228
            .|:.|.:|:       |..::.|..:....|.||:.::    :|::||       :..:.|..::
 Worm   147 DINQCYLILIVGLAVWPATMLPSPMHFWQAALFSAGSSTCAVILVVVG-------LAHDAPVCAQ 204

  Fly   229 RDPFVAAGKLPTF--FGTVLFALEAVGVILAIEENMATPKSFVGPCGILNSGMSIVLG------L 285
            ..|......|..|  |||.:||......:..|:.:|..|..||         .|:||.      |
 Worm   205 DAPHEEPNLLKAFMAFGTFVFAFGGHATLPTIQHDMKKPAHFV---------HSVVLAIIFCTML 260

  Fly   286 YVLLGFFGYWKYGNESEGSITLNIPQSEIPAQVVKVFFAITTWISYALQGYVTAHILW------- 343
            |:.:...||:.||:        .:.::.||:..:|       ||...:...:..|::.       
 Worm   261 YMCIAVGGYFVYGS--------TVGEAIIPSLQIK-------WIQQTVNLMIAVHVITTIVIVMS 310

  Fly   344 -------------DKYLAKRFKETRQTFYELIFRAIIVLLTFGCAVAIPDLSVFLSLVGSFCLSI 395
                         .|:..|||          :.|:|:........::||.....|.|:|:..:.:
 Worm   311 PPIQQVEQLLKVPHKFGVKRF----------LVRSILFWFVIFIGLSIPHFGPVLDLIGASTMVL 365

  Fly   396 LGLIFPVLLQICV-----------------QYTEGYGPF--------RIKLIINLLLLCFGIFGG 435
            :.||.|.:..:.:                 :.|.....|        ::.|.:|..:|.|||.||
 Worm   366 MTLILPPIFYLSIRTQEIIWLQGNEKSDAAEPTHERATFKEILRLTPKLILALNAAVLIFGIIGG 430

  Fly   436 VVGTYVSILDII 447
            .:.|..|::.::
 Worm   431 TLSTVTSVIRLV 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1139NP_647686.1 SdaC 36..404 CDD:223884 79/397 (20%)
SLC5-6-like_sbd 42..444 CDD:294310 91/462 (20%)
R02F2.8NP_498173.1 Aa_trans 22..416 CDD:279788 81/439 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166186
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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