DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1139 and skat-1

DIOPT Version :9

Sequence 1:NP_647686.1 Gene:CG1139 / 38264 FlyBaseID:FBgn0035300 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_498989.1 Gene:skat-1 / 176271 WormBaseID:WBGene00010307 Length:460 Species:Caenorhabditis elegans


Alignment Length:451 Identity:114/451 - (25%)
Similarity:212/451 - (47%) Gaps:42/451 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 ANGSNDD----YDPHQHRELKNPTTNFQTFAHFLKASVGTGVLAMPSAFAHAGYVNGTLLTLIIG 84
            |...||.    ..|.:..::..||....|.:   |:....|..::|.|:...|.....:::.:|.
 Worm    17 AESMNDGRALVQPPARSGDVITPTRAVLTLS---KSMFNAGCFSLPYAWKLGGLWVSFVMSFVIA 78

  Fly    85 SLALYCLHILIKCMYILCK---RQRVPYVSFSQAM----NLGLKQGPPWLRCLAPIAVPFVDGFL 142
            .|..|..|||::....|.|   |..:.|..|::.:    ::      .:||..:...:.||:..:
 Worm    79 GLNWYGNHILVRASQHLAKKSDRSALDYGHFAKKVCDYSDI------RFLRNNSKAVMYFVNVTI 137

  Fly   143 AFYHFGICCVYVVFIAESIKQLVDEYLVVWDVRIHMCIIIVP-----LLLIYSIKNLKLLAPFSS 202
            .||..|:|.|.::||::::..||.::|  ...|....|::..     :||......:::::.|:.
 Worm   138 LFYQLGMCSVAILFISDNLVNLVGDHL--GGTRHQQMILMATVSLFFILLTNMFTEMRIVSFFAL 200

  Fly   203 AANLLLLVGFGIILYYIFEELPPLSERDPFVAAGKLP---TFFGTVLFALEAVGVILAIEENMAT 264
            .:::..::|..:|:.|..::  | ::.|...||....   |..|..::|.|...:||.||..:..
 Worm   201 VSSVFFVIGAAVIMQYTVQQ--P-NQWDKLPAATNFTGTITMIGMSMYAFEGQTMILPIENKLDN 262

  Fly   265 PKSFVGPCGILNSGMSIVLGLYVLLGFFGYWKYGNESEGSITLNIPQSEIPAQVVKVFFAITTWI 329
            |.:|:.|.|:|::.|.|.......||||||..:|:....:||.|:|:..: ...|.||..:.:.:
 Worm   263 PAAFLAPFGVLSTTMIICTAFMTALGFFGYTGFGDSIAPTITTNVPKEGL-YSTVNVFLMLQSLL 326

  Fly   330 SYALQGYVTAHILWDKYLAK---RFKETRQTFYELIFRAIIVLLTFGCAVAIPDLSVFLSLVGSF 391
            ..::..||...:.::.:..|   ||....:...:..||...||:|:..||.||.|.:.:.|||..
 Worm   327 GNSIAMYVVYDMFFNGFRRKFGARFPNVPKWLSDKGFRVFWVLVTYLMAVLIPKLEIMIPLVGVT 391

  Fly   392 CLSILGLIFPVLLQICVQYTEGYG--PFR---IKLIINLLLLCFGIFGGVVGTYVSILDII 447
            ..::..||||...::...:|:..|  .:|   .|:.|||:::..|:|..:.|.|.:|..||
 Worm   392 SGALCALIFPPFFEMITFWTDWKGLLTYRQRMTKIFINLVVMAIGVFAIIAGVYTNIHAII 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1139NP_647686.1 SdaC 36..404 CDD:223884 96/385 (25%)
SLC5-6-like_sbd 42..444 CDD:294310 107/424 (25%)
skat-1NP_498989.1 Aa_trans 35..446 CDD:279788 106/425 (25%)
SdaC 40..448 CDD:223884 106/422 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 1 1.010 - - D284074at33208
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X121
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.890

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