DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1139 and Slc38a1

DIOPT Version :9

Sequence 1:NP_647686.1 Gene:CG1139 / 38264 FlyBaseID:FBgn0035300 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_620187.1 Gene:Slc38a1 / 170567 RGDID:69645 Length:485 Species:Rattus norvegicus


Alignment Length:518 Identity:107/518 - (20%)
Similarity:192/518 - (37%) Gaps:130/518 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 YPTTLELT-----TPTKSANGSNDDYDPHQHRELKNPTTNFQ-----------TFAHFLK----- 54
            :.:.||||     |..:..|.|||..|   ..|::|...|.:           |.:|..|     
  Rat     4 FKSGLELTELQNMTVPEDDNVSNDSND---FTEVENGQINSKFISDRESRRSLTNSHLEKRKCDE 65

  Fly    55 -----------------ASVGTGVLAMPSAFAHAGYVNGTLLTLIIGSLALYCLHILIKCMYILC 102
                             |.:|:|:|.:..|.|:.|.:...:|...:..|::|.:::|     ::|
  Rat    66 YIPGTTSLGMSVFNLSNAIMGSGILGLAFALANTGILLFLILLTSVTLLSIYSINLL-----LIC 125

  Fly   103 KRQR--VPYVSFSQAMNLGLKQGPPWLRCLAPIAVPFVDGFLAFYHFGICCVYVVFI----AESI 161
            .::.  :.|....:             :.........:.|..:..:.|....|:..:    ..:|
  Rat   126 SKETGCMVYEKLGE-------------QVFGTTGKLVIFGATSLQNTGAMLSYLFIVKNELPSAI 177

  Fly   162 KQLV--DEYLVVW--DVRIHMCI----IIVPLLLIYSIKNLKLLAPFSSAANLLLLVGFGIILYY 218
            |.|:  :|....|  |.|:.:.:    ||:||.|   :|||..|. ::|..:|..:|.|.|::.|
  Rat   178 KSLMGEEETFSAWYVDGRVLVVMVTFGIILPLCL---LKNLGYLG-YTSGFSLSCMVFFLIVVIY 238

  Fly   219 IFEELPPLS-ERDPFVAAG-------KLPTFFGTVLFALEAVGV-------ILAIEENMATPKSF 268
            ...::|.:: |::..|:|.       |..||....::||..:..       :|.|...: ..:|.
  Rat   239 KKFQIPCMNGEQNSTVSANVTDACTPKYVTFNSKTVYALPTIAFAFVCHPSVLPIYSEL-KDRSQ 302

  Fly   269 VGPCGILNSGMSIVLGLYVLLGFFGY------------WKYGNESEGSI-TLNIPQSEIPAQVVK 320
            .....:.|.....:..:|.|...|||            .||  :|.|.| .|.:..:.|.|.::.
  Rat   303 KKMQMVSNISFFAMFVMYFLTAIFGYLTFYEKVQSDLLHKY--QSTGDILILTVRLAVIVAVILT 365

  Fly   321 V---FFAITTWISYALQGYVTAHILWDKYLAKRFKETRQTFYELIFRAIIVLLTFGCAVAIPDLS 382
            |   ||.:.:             .|::.....:|...|.....:|...||.||    .:.||.:.
  Rat   366 VPVLFFTVRS-------------SLFELAKKTKFHLCRHVLVTIILLVIINLL----VIFIPSMK 413

  Fly   383 VFLSLVGSFCLSILGLIFPVLLQICVQYTEGYGPFRIKLIINLLLLCFGIFGGVVGTYVSILD 445
            ....:||....::|..|.|..|.:  :.|...|....:.|...|.|..|:...::...:.|.|
  Rat   414 DIFGVVGVTSANMLIFILPSSLYL--KITNQDGDKNTQRIWAALFLALGVLFSLISIPLVIYD 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1139NP_647686.1 SdaC 36..404 CDD:223884 88/445 (20%)
SLC5-6-like_sbd 42..444 CDD:294310 93/479 (19%)
Slc38a1NP_620187.1 SLC5-6-like_sbd 69..472 CDD:382020 89/446 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352627
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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