DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SCOT and atoD

DIOPT Version :10

Sequence 1:NP_647683.1 Gene:SCOT / 38261 FlyBaseID:FBgn0035298 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_416725.1 Gene:atoD / 947525 ECOCYCID:EG11669 Length:220 Species:Escherichia coli


Alignment Length:222 Identity:90/222 - (40%)
Similarity:128/222 - (57%) Gaps:18/222 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 DAVADVQDGAQILFGGFGICGIPEKMINALKQKGVKNITGVSNNGGVDDTGLGVLIKQKQVSKVI 106
            ||....:||..|:.|||...|.|.:::.||.:.||:::|.::|:....|||:|.||...:|.|||
E. coli    10 DATGFFRDGMTIMVGGFMGIGTPSRLVEALLESGVRDLTLIANDTAFVDTGIGPLIVNGRVRKVI 74

  Fly   107 GSYVGENTELVRQYLEGELAVELTPQGTLAEKIRAGGAGIPAFYTPTGYATLVQEGGAPIKYSKD 171
            .|::|.|.|..|:.:.||:.|.|.|||||.|:||.||||:..|.||||..|:|:||         
E. coli    75 ASHIGTNPETGRRMISGEMDVVLVPQGTLIEQIRCGGAGLGGFLTPTGVGTVVEEG--------- 130

  Fly   172 GKVEISSEKKPVKEFNGKNYVMEESIFADFAFVKAQKADPLGNLVFNKAARNFNAPMCRAAKITV 236
                     |.....:||.:::|..:.||.|.::|.:.|.||||.:..:|||||..:..||.||:
E. coli   131 ---------KQTLTLDGKTWLLERPLRADLALIRAHRCDTLGNLTYQLSARNFNPLIALAADITL 186

  Fly   237 AEVEEIVPIGALSPDEIHVPGIYINRI 263
            .|.:|:|..|.|.||.|..||..|:.|
E. coli   187 VEPDELVETGELQPDHIVTPGAVIDHI 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCOTNP_647683.1 AtoD 35..268 CDD:441394 90/222 (41%)
SugarP_isomerase 298..504 CDD:469729
atoDNP_416725.1 PRK09920 1..219 CDD:182146 90/222 (41%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.