DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mv and Nsmaf

DIOPT Version :10

Sequence 1:NP_647681.2 Gene:mv / 38259 FlyBaseID:FBgn0288310 Length:3535 Species:Drosophila melanogaster
Sequence 2:XP_006537725.1 Gene:Nsmaf / 18201 MGIID:1341864 Length:956 Species:Mus musculus


Alignment Length:977 Identity:243/977 - (24%)
Similarity:364/977 - (37%) Gaps:264/977 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  2503 EPIENLKPLCDALGIKENDSSWNLVHELDRLDQNRNNMAAKQK----TLLEKTVYRFEPLVQQCV 2563
            :||..: ||.|.|.|.::.            :...|...||.|    :|:...:|..:       
Mouse   101 QPILKI-PLRDCLKIGKHG------------ENGANKHFAKAKSWGISLIFSQIYFIK------- 145

  Fly  2564 ESSMVTTRKVAELQNAERKALMCHMKVYDDTYTYTKWLEIIRRMTHEGAPWHSAERAECSWELDD 2628
            |.::|...|:      ||..:           .|...||:..::...........||.|..:|.|
Mouse   146 EHNIVAPYKI------ERGKM-----------EYVFELEVSGKVEDVVETLLQLHRASCLDKLGD 193

  Fly  2629 TEG--PSRVHTRLRRCHLDIDRRFFMNEYRPGQGHREDLEPYVRPLDYLIASYDQQLNISLNSQI 2691
            ...  .:.:.:||.|...|.:|                           ..|..::|::...:::
Mouse   194 QMAMITAILQSRLARTSFDKNR---------------------------FQSVSEKLHMECKAEM 231

  Fly  2692 LYNFAAKFLPVDGEIEGEIIITDLKLYFLATYRCRYFNVNCDIANITEIWLKRYQHQETAFEILL 2756
            :......        .|.:.|||..|||..........|...:.::..|:.:|:.......|:..
Mouse   232 VTPLVTN--------PGHVCITDTSLYFQPLNGYPKPVVQITLQDVRRIYKRRHGLMPLGLEVFC 288

  Fly  2757 DTNKSL-------FFSLQNADDWKIMREVFCDKIVATPDQSKVIAITQQWREGLLTNWEYLMTLN 2814
             |:..|       |:..|:.||.......:.:...|   :....:...||:.|.|:|::||:.||
Mouse   289 -TDDDLCSDIYLKFYEPQDRDDLYFYIATYLEHHAA---EHTAESYMLQWQRGHLSNYQYLLHLN 349

  Fly  2815 QISGRTYNDLMQYPVFPWVLANYNSEVLDLREGHNFRRLGRPIAVQVEENEKHYISNYTYIDSTN 2879
            .::.|:.|||.|||||||::::|:|..|||.....||.|.:|:.....|..:..::.|..:....
Mouse   350 NLADRSCNDLSQYPVFPWIISDYSSPELDLSNPATFRDLSKPVGALNAERLERLLTRYQEMPEPR 414

  Fly  2880 TTMGSLILKPYHYSSHYSNSGTVLHFLVRVPPFTSYFLRYQDNDFDLPDRTFHALNTTWLLASRD 2944
                      :.|.||||:.|.||.:|||:.|  .|.|..|:..||..||.|:::..|| ....|
Mouse   415 ----------FMYGSHYSSPGYVLFYLVRIAP--EYMLCLQNGRFDNADRMFNSIAETW-KNCLD 466

  Fly  2945 SPTDVKELIPEFFCLPEMF-ENFERFKFGCRQNGERVEDVSLPPW--SQRDSRLFVLIHRQALES 3006
            ..||.|||||||:.....| .|..:...|.||.|:.|:||.||.|  |.:|   |:..::.||||
Mouse   467 GATDFKELIPEFYDEDVSFLVNSLKLDLGKRQGGQMVDDVDLPAWASSPQD---FLQKNKDALES 528

  Fly  3007 ELVRNQIHNWIDLIFGYKQSGESAVEAINVFHPATYAVFLD-SEISDPIEREAVKTMVKTYGQMP 3070
            ..|...:|.||||||||||.|..|:.|.|||||.||...:| :.|.||.|:.|:.|.:..:||.|
Mouse   529 GYVSEHLHEWIDLIFGYKQKGSEAIGAHNVFHPLTYEGGVDLNSIEDPDEKVAMLTQILEFGQTP 593

  Fly  3071 RQLFKSPHP---------ASKPLDY--SLVGKPI----------VSTVRGLRWGVYVGSPQLKAP 3114
            :|||.:|||         .|:...|  ||...|:          ....|.|.|.   ...:|:..
Mouse   594 KQLFVTPHPRRITPKFKSLSQASSYNASLTDSPVSPGEESFEDLTEESRTLAWS---NIAKLQLH 655

  Fly  3115 SWANIHKIPGTEHLVSFCNTNVVYA---------------------------------LPGRASV 3146
            ....|||...|...|| ||.:.|:.                                 |||..:|
Mouse   656 EQYKIHKEAVTGIAVS-CNGSSVFTTSQDSTLKMFSKESKMLQRSISFSNMALSSCLLLPGDTTV 719

  Fly  3147 MQ--------------GAEPDTYNVISWGYDDRIVRIQPLNK-----------------PQAKPK 3180
            :.              |...||.    .|:||.:.:|...|.                 |...|.
Mouse   720 ISSSWDNNVYFYSIAFGRRQDTL----MGHDDAVSKICWHNDRLYSGSWDSTVKVWSGVPAEMPG 780

  Fly  3181 NLLHNGTFDDITACGCDVN----------------SNQLWFGHKSGRISVY-----------KCT 3218
            ...|.  ||.:.....||:                |..|..|.|.|.::::           .|.
Mouse   781 TKRHQ--FDLLAELEHDVSMTYLLEKVNTINLNAVSTLLVSGTKEGMVNIWDLTTATLLHQTSCH 843

  Fly  3219 GGLDSQQRASAKSRQSYARGFSLSYNSAFRKMTNKGIGGGGSERVDEAGNLHPTSSASSV----- 3278
            .|.......|..||...:.|..                 |....:|....:..:|.||..     
Mouse   844 SGTVCDAAFSPDSRHILSTGVD-----------------GCLNVIDVQTGMLISSMASEEPQRCF 891

  Fly  3279 --NSSSISSGGDAFQRDGADLNW--LGPTLLVR---HTDEITCITLSVEFKIAVTAGRDGIAVIW 3336
              :.:|:.||    .|.|..|.|  ||..:..|   ||..:||:.::.:....:|.|.|...:.|
Mouse   892 VWDGNSVLSG----SRSGELLVWDLLGAKVSERIQGHTGAVTCMWMNEQCSSIITGGEDRQIMFW 952

  Fly  3337 DL 3338
            .|
Mouse   953 KL 954

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mvNP_647681.2 PH-like 2704..2785 CDD:473070 17/87 (20%)
Beach 2796..3080 CDD:214982 120/296 (41%)
WD40 <3302..>3518 CDD:441893 10/40 (25%)
NsmafXP_006537725.1 PH_BEACH 221..314 CDD:275391 18/101 (18%)
Beach 333..604 CDD:460459 120/286 (42%)
WD40 <648..955 CDD:441893 64/335 (19%)
WD40 repeat 665..702 CDD:293791 6/37 (16%)
WD40 repeat 708..744 CDD:293791 7/39 (18%)
WD40 repeat 749..793 CDD:293791 7/45 (16%)
WD40 repeat 806..841 CDD:293791 5/34 (15%)
WD40 repeat 847..884 CDD:293791 7/53 (13%)
WD40 repeat 928..952 CDD:293791 5/23 (22%)

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