DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mu2 and AT3G21480

DIOPT Version :10

Sequence 1:NP_523887.2 Gene:mu2 / 38257 FlyBaseID:FBgn0002872 Length:1280 Species:Drosophila melanogaster
Sequence 2:NP_188785.2 Gene:AT3G21480 / 821702 AraportID:AT3G21480 Length:1041 Species:Arabidopsis thaliana


Alignment Length:1113 Identity:225/1113 - (20%)
Similarity:386/1113 - (34%) Gaps:353/1113 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   339 SPDPFVRPADNTNTATPQFGGVKQLVVATIETPTATPDTNSQEKNQDMIATQRFPRHKLLESDEE 403
            ||....:|.|:...::...|..|..::...:|...  |.|:...:|.|            |:...
plant     9 SPYEETQPIDSNPPSSSDSGEDKDSLLGDCDTQPV--DDNALINDQYM------------ETQVM 59

  Fly   404 DNGQNNQDFV---ATQAFNLG-------RPQAPQENEANQDLIATQAFNLAPPQ-KVDSPKPST- 456
            |...:|::|:   .|||.:||       ..:..|..||: |.:|||..:|...: .|||....| 
plant    60 DTECDNEEFLLCNETQAVDLGFETGEEVLVEGKQLLEAS-DGLATQVLDLCDDEVVVDSDDDVTD 123

  Fly   457 ----ANDASNQDFIETQAFNLGIPQANMASPENNEISNQDLIATQAFPAKIN------------- 504
                .:|.|:.|...::|      :..::|.||.:.:|:.:.:...|.|..|             
plant   124 VLEGNSDLSDSDDSGSKA------ETVLSSEENRQDANEKVKSAVVFDAWSNEHGVSGKKVARFA 182

  Fly   505 SSRCQDFVATQ-PFHVVNQHSVSLQDKENIPLDDSVKVASDSKFFEATCGEIDAVLNEMISGTVA 568
            |.|...|.|:. ...|.||.|.:......|....|.|..:.:...|.:.||:.            
plant   183 SVRSAAFRASAVAARVANQKSANTDCSTLINCHSSGKGTTHNSGLENSVGEVG------------ 235

  Fly   569 TSPVSPNEESIPFFEPCVIKDKNHYQKICQIEGVFSNVSNRSRGRTDGTGFGRLKRVAKSESPPE 633
                  |::|:   ....:::|...:                      ||....:::...:.|.|
plant   236 ------NQQSL---TSLFVEEKKDLR----------------------TGKKTARKLFVEDFPEE 269

  Fly   634 ----TPIRKDRRRSE--GSERPGSNSRERLNNLVDK-------------------KSEALNKSVI 673
                |....|.....  ||:.||..|:....|||||                   |:|..:|.|.
plant   270 KFHSTDCNVDLGNLSYIGSQEPGEESQASALNLVDKLISECRLEFDFEVQADYGRKTEDKSKFVQ 334

  Fly   674 REHGIDSIPEEITK----------------EDKSDSEEKGDCFNNVVNQW---RSRKRRIQSRPG 719
            ...|    |:|:.|                :|..:.|..||.:....:::   .|::|...|.| 
plant   335 IFKG----PQELAKKVSYKSGAVGNNIFDWDDNREDEGGGDIYRRRKDEFFGVASKRREFSSLP- 394

  Fly   720 TPGSSSERNEVNADVVDKPNEEPPTKNI-----RARKAKKAEKADSSKDIPK--------PTTRT 771
                ..::.|:....|||......:|.:     |:||..:..|.:..|::.:        ..|:.
plant   395 ----REQKRELIPVAVDKRWARSDSKLLKHSVTRSRKNIQGAKKNLGKELDEVREAAVLGNDTQV 455

  Fly   772 RRQTSDEDVRTPDLGKGRKAKNTASSKADTSKNIAKGSKR-------VTRQNSADD-AELLEEDS 828
            ..:..|      ||..|.:.|....:...|.|.::...:|       ||||:.... .:.:.:|.
plant   456 AAEAID------DLCSGDRGKFDGEASCLTGKKLSPEEERGFSPGGVVTRQSKGTKRIQAMSKDE 514

  Fly   829 SVQTESGKRVKKVK-------------SSKGE----------TSKDIPKAKPRTRRQTADE-DAM 869
            .::    ||:||..             ||.|:          .|:.:..|...|::...|| |.:
plant   515 LLK----KRMKKASPSPAKACRTNIEGSSNGDQLNKEGPCCWKSRKVQTASRETKKNLVDEFDEV 575

  Fly   870 TPKAEKE-----------------------------RQIQGEETKDMSKP-------------AA 892
            :.::..|                             |:|..|....:.|.             ..
plant   576 SQESNTEMFDRHEEAEAGPDTQMAAEVMNALHSGDGREIDPEPNNLIGKKLLLEGGISRCGVVTR 640

  Fly   893 RTRRKASAEETESAAQAVKPKRGGKGKKNETTKAEATVEKPMVRTRRM----TIAEDSSTLTEVK 953
            :::|....:..::..:::||    |.||..:..|: :.||.|.|..:.    |..|..::.||.:
plant   641 KSKRIKGIQAVDNDVESLKP----KNKKARSILAK-SFEKNMDRYSKNDKVDTPDEAVASTTEKR 700

  Fly   954 TG--------GALIKRA------VV------RISRVSIEQLESSTSAGNNARVTGAAQSRSTTPS 998
            .|        ..|:|::      |:      |.:|:|.:|:..:              .||:.|:
plant   701 QGELSNKHCMSKLLKQSHRGEAEVLNYPKRRRSARISQDQVNEA--------------GRSSDPA 751

  Fly   999 IEEPSSSSAAAKEP--NVSTATTRRRAKRLTSGEEPTS-------SSDVPTKKPKMSVDEEVLKN 1054
            .:.|:.|    |.|  |||.........||:..:..||       |..||..:| :|..:...|.
plant   752 FDTPAKS----KTPSTNVSPICMGDEYHRLSCKDSFTSHTTREFRSLTVPVAEP-ISETKSTRKR 811

  Fly  1055 RS-GATTTRFSQP-DADPLRAINLYVRKAKTTTGKIKVAFTMCNRPALETVLKSLKHVVEITEDP 1117
            |. |:....|||. |.|        |.|.:.   ||...|.:....:    :|...|        
plant   812 RDLGSICVLFSQHLDED--------VTKHQK---KILARFDISEASS----MKEATH-------- 853

  Fly  1118 LQCDLLVMDKGERTYKFLTVIASNKPVLSTNWLHSVKKTRSIDIKAD---HLFSDPTFEETYKFK 1179
                 .:.|...||...|..|||.|||::|.||.|:.:   ::|..|   ::..|...|:.:.|.
plant   854 -----FIADNFTRTRNMLEAIASGKPVVTTQWLESIDQ---VNIYVDEDMYILRDSKKEKEFCFN 910

  Fly  1180 PSSVLEHPR---LLYGLHFMLGKDIVPKANEMKVIIHSAGGKVHAQP------PSLA---ISVDL 1232
            ....|...|   ||.|....:..:..|..|.:..::.:    ||..|      .||:   :..:|
plant   911 MGVSLARARQFPLLQGRRVFITPNTKPALNTITTLVKA----VHGLPVERLGRSSLSEDKVPENL 971

  Fly  1233 YVVTTSKD 1240
            .|::..:|
plant   972 LVLSCEED 979

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mu2NP_523887.2 MU2_FHA 5..98 CDD:375648
BRCT_MDC1_rpt1 1088..1155 CDD:349375 18/66 (27%)
BRCT_PAXIP1_rpt6_like 1189..1271 CDD:349385 13/61 (21%)
AT3G21480NP_188785.2 BRCT_MDC1_rpt1 819..882 CDD:349375 24/90 (27%)
BRCT_PAXIP1_rpt6_like 923..1009 CDD:349385 13/61 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.