DRSC/TRiP Functional Genomics Resources

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Protein Alignment mu2 and brc1

DIOPT Version :10

Sequence 1:NP_523887.2 Gene:mu2 / 38257 FlyBaseID:FBgn0002872 Length:1280 Species:Drosophila melanogaster
Sequence 2:NP_001417957.1 Gene:brc1 / 2541071 PomBaseID:SPBC582.05C Length:849 Species:Schizosaccharomyces pombe


Alignment Length:568 Identity:120/568 - (21%)
Similarity:206/568 - (36%) Gaps:148/568 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   759 DSSKDIPKPTTRTRRQTSDEDVRTPDLGKGRKAKNTASSKADTSKNIAKGSKRVTRQNSADDAEL 823
            ||..|...|......:.|.||.....|.|| .::......:|.|.:..||:|        .:.||
pombe   374 DSYMDFIFPCPLNVEKGSFEDTLKSSLTKG-NSEVLLDDLSDPSVSSIKGNK--------TNEEL 429

  Fly   824 LEEDSSVQTESGKRVKKVKS-SKGETSKDIPKAKPRTRRQTADEDAMTPKAEKERQIQGEETKD- 886
            .:|..|.....||.:....| |.....|....|....|.   ||.:......:|.|.:|....| 
pombe   430 EKEFKSTSDNFGKHIILTSSFSNQSADKGSSLAAEDDRN---DEGSTITGVNRELQDEGRLEIDA 491

  Fly   887 -------------MSKPAARTRRKASAEE------TESAAQAVKPKRGGKGKKNETTKAEATVEK 932
                         :..|:..:.::||:::      |:.....:|.|                  .
pombe   492 KSSKTNTPPSPLLVGTPSKESLKEASSDDELPVLATKLVDNVIKEK------------------S 538

  Fly   933 PMVRTRRMTIAEDSSTLTEVKTGGALIKRAVVRISRVSIEQLESSTSAGNNARVTGAAQSRSTTP 997
            |:..|.::.:.....|.|:.       |:.:..:.||:  .|.||....:..:  .||.:.|...
pombe   539 PLSLTPKVVVPSHKETYTDE-------KKLIDELDRVN--PLNSSQLLRSKRK--SAATALSMLQ 592

  Fly   998 SIEEPSSSSAAAKEPNVSTATTRRRAKR-LTSGEEPTSSSDVPTKKPKMSVDEEVLKNRSGATTT 1061
            ::..|...:...::       .||:..| ::|||....||:                  |..|..
pombe   593 NVIMPDVLAFEREK-------KRRQTHRSVSSGEVSRESSE------------------SRNTNA 632

  Fly  1062 RFSQPDADPLRAINLYVRKAKTTTGKIKVAFTMCNRPALETVLKSLKHVVEITEDPLQCDLLVMD 1126
            :.|:         .:|:    |.||..|       :|:::. ||.|.  :.||.:|.:|..|:..
pombe   633 KASK---------RVYI----TFTGYDK-------KPSIDN-LKKLD--MSITSNPSKCTHLIAP 674

  Fly  1127 KGERTYKFLTVIASNKPVLSTNWLHSVKKTRSIDIKADHLFSDP--------TFEETYKFKPSSV 1183
            :..||.|||..|.....|::.:|::|..||..|..:..:|.:||        |.|...|   .:.
pombe   675 RILRTSKFLCSIPYGPCVVTMDWINSCLKTHEIVDEEPYLLNDPEKELELGCTLESALK---RAR 736

  Fly  1184 LEHPRLLYG-LHFMLGKDIVPKANEMKV--IIHSAGGKV------------HAQPPSLAI---SV 1230
            .:.|.||.. :.::..|.:.|: |...|  |:.|.||..            |.:..::.:   :.
pombe   737 AQGPSLLEDYVVYLTSKTVAPE-NVPAVISIVKSNGGVCSTLNVYNKRLARHLEDGNVVLITCNE 800

  Fly  1231 DLYVVTTSKDTKSKRR---LNNYEKVHFIKTEAVMQALVQHNIEMLQE 1275
            |.::.|...|..|:.:   |.||:  ..|||  |::..:..|..:..|
pombe   801 DSHIWTNFLDNASQNKTIFLQNYD--WLIKT--VLRQEIDVNDRIADE 844

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mu2NP_523887.2 MU2_FHA 5..98 CDD:375648
BRCT_MDC1_rpt1 1088..1155 CDD:349375 19/66 (29%)
BRCT_PAXIP1_rpt6_like 1189..1271 CDD:349385 23/102 (23%)
brc1NP_001417957.1 BRCT <5..75 CDD:469589
BRCT_BRC1_like_rpt2 81..155 CDD:349389
BRCT_BRC1_like_rpt3 195..272 CDD:349390
BRCT_BRC1_like_rpt4 290..357 CDD:349391
BRCT_BRC1_like_rpt5 638..705 CDD:349374 24/80 (30%)
BRCT_BRC1_like_rpt6 721..836 CDD:349392 26/122 (21%)
Blue background indicates that the domain is not in the aligned region.

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