DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5687 and slc5a8l

DIOPT Version :9

Sequence 1:NP_001286910.1 Gene:CG5687 / 38255 FlyBaseID:FBgn0035293 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_001030141.1 Gene:slc5a8l / 556156 ZFINID:ZDB-GENE-061110-98 Length:610 Species:Danio rerio


Alignment Length:604 Identity:202/604 - (33%)
Similarity:339/604 - (56%) Gaps:34/604 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 ATFSGYDYVILLGMLVISLGIGIFYGFFQKGGSSSNEFLLGS-EMSIFPVTLSLTTSFITAIELL 157
            ||||.:|||:..|:::::.|||:|..|..:..:||:|||||. :|:..||.||||.||::.|.::
Zfish     9 ATFSVWDYVVFAGLILVAAGIGLFQSFRGRKEASSDEFLLGGRQMTAVPVALSLTASFMSGITVI 73

  Fly   158 GNPSEMYFQGTQFVLIVIPMVIVIPVAVKIFYPIYFKMELTSCYEYLGIRFGKEIRILGAVLYVI 222
            |.|:|.|..||.|.|..|...|:..::.:||.|:::::.:||.||||.:|:.|.||::|..:|:|
Zfish    74 GTPAEAYLYGTPFWLFFISYAIMSTISAEIFVPLFYRLNITSTYEYLEMRYNKLIRVIGTSMYII 138

  Fly   223 QMCFYTAVAVLAPAIALSKATGLDTKIAVVLIYVVCVFYSSQGGMKAVVIADSFQAAVLAVSLVL 287
            |...||.:.:.|||:||::.||||....:|....||:.|.:.||:|||:..|.||..::....|.
Zfish   139 QTALYTGMVIFAPALALNQITGLDLWGVLVATGAVCIIYCTLGGLKAVIWTDVFQMIIMLGGFVA 203

  Fly   288 IVGLGCFYSGNPIQVFQTASDHNRLEFFNMDPDPTTRHTVWSVVIGGFFYWTSLFCTNQASVQKC 352
            ::..|....|...:|:..:....|||.|:.||||..||:.|::|:||...|.|::..||:.||:.
Zfish   204 VIARGAVLQGGLGRVWNDSFYGGRLETFSFDPDPLRRHSFWTIVVGGSLMWASMYSINQSQVQRY 268

  Fly   353 MSLKSLRLAKIALGFAIIGLIVVFLLNFYTGLMVFTHYADCDPLTAGRISATDQLLPYYVINTYE 417
            :|.:::..||::|...::||.|...|...:||.:::.|.||||.|...:.||||||||.|::...
Zfish   269 ISCRTMTHAKLSLYVNMVGLWVTVSLAMMSGLTMYSIYKDCDPFTNKDVGATDQLLPYLVMDILA 333

  Fly   418 HISSVAGIFVAGIFAASLGTVASALNSLSAVTCEDLLVNGMNIKISPEKGATYAKWMSLG----F 478
            ....:.|:|||..::.:|.||:|::|:|.|||.||.:....     |........|:::|    :
Zfish   334 DFPGLPGLFVAAAYSGTLSTVSSSINALVAVTVEDFMKPAW-----PSLTERQLSWINMGMSVFY 393

  Fly   479 GIASFGLVFIVEHLGGVLQATLTLNGLIGGVTLGLFVLGIACKQANTKGAFYGGLLSLALVIFVG 543
            |....|:..:...:|.:|||.|::.|:|.|..|||::||:..:.||:.|...|....||:.::||
Zfish   394 GAVCIGMAGVASMMGNILQAALSIFGMISGPLLGLYMLGMFFRCANSTGGLAGLASGLAITLWVG 458

  Fly   544 VVAQI---VSVEQPALPTSIDKCDC-----HVNMT---NIIGSLLTEPLEVIEEGGFTSWPIFRL 597
            :.||:   :..:...||.|::.|..     ...||   .::.:...:|...:.:    :|  :.|
Zfish   459 IGAQLYPPLPEKTLRLPLSVEGCVALNTSETTTMTPFSTVLQTTTPQPRPALAD----NW--YSL 517

  Fly   598 SYMWYSMIGCLLTVFLGWFISLIIDFIQRRNV---LKITGKDIDNPAVSEEIFKSDSQVQYTTTT 659
            ||:::|.:|.::|:.:...:|.|....:::.|   |.|:..|:    :.....||||:|.....|
Zfish   518 SYLYFSPVGIVVTMIIALIVSAISGGCKQKKVRPELFISKSDL----ICFRCKKSDSEVSDLIET 578

  Fly   660 VIGDPRELTSDEGHVNHAI 678
            ...|.:.|.|...:.|..:
Zfish   579 KPKDNQGLDSPVFYDNEIV 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5687NP_001286910.1 SLC5sbd_NIS-SMVT 99..620 CDD:271383 183/536 (34%)
slc5a8lNP_001030141.1 SLC5sbd_SMCT1 8..547 CDD:271402 188/548 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1180002at2759
OrthoFinder 1 1.000 - - FOG0000151
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR42985
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X112
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.010

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