DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5687 and Slc5a12

DIOPT Version :10

Sequence 1:NP_647678.3 Gene:CG5687 / 38255 FlyBaseID:FBgn0035293 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_001102058.1 Gene:Slc5a12 / 362188 RGDID:1311652 Length:619 Species:Rattus norvegicus


Alignment Length:556 Identity:199/556 - (35%)
Similarity:321/556 - (57%) Gaps:37/556 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 TFSGYDYVILLGMLVISLGIGIFYGFFQKGGSSSNEFLLGS-EMSIFPVTLSLTTSFITAIELLG 158
            :|..:|||:...:.|||.|||:|:...::..::|.|||:|. :||..||.||||.||::|:.:||
  Rat     5 SFEAWDYVVFAALFVISSGIGVFFAIKERKKTTSREFLVGGRQMSFAPVALSLTASFMSAVTVLG 69

  Fly   159 NPSEMYFQGTQFVLIVIPMVIVIPVAVKIFYPIYFKMELTSCYEYLGIRFGKEIRILGAVLYVIQ 223
            .|:|:|..|..|::.:|....|:....::|.|::::..:||.||||.:||.|.:|....::|::|
  Rat    70 TPAEVYRFGASFLIFLISYAFVVFFTSELFLPVFYRSGITSTYEYLQLRFNKPVRYAATIIYILQ 134

  Fly   224 MCFYTAVAVLAPAIALSKATGLDTKIAVVLIYVVCVFYSSQGGMKAVVIADSFQAAVLAVSLVLI 288
            ...||.|.|.|||:||::.||.:...:|....:||.||.|.||:||||..|:||..|:.|..:.:
  Rat   135 TILYTGVVVYAPALALNQVTGFNLWASVFATGIVCTFYCSLGGLKAVVWTDAFQMVVMIVGFLTV 199

  Fly   289 VGLGCFYSGNPIQVFQTASDHNRLEFFNMDPDPTTRHTVWSVVIGGFFYWTSLFCTNQASVQKCM 353
            :..|..:.|....|.:.|.:.:||:..:.|.||..|||.|::.:||.|.|..::..||:::|:|:
  Rat   200 LIQGSNHVGGFDNVLEQARNGSRLDIVDFDVDPLRRHTFWTIAVGGTFTWLGIYGVNQSTIQRCI 264

  Fly   354 SLKSLRLAKIALGFAIIGLIVVFLLNFYTGLMVFTHYADCDPLTAGRISATDQLLPYYVINTYEH 418
            |.|:.:.||:||.|.::||.::.:...:.||:::.:|.||||.|:|.|.|.|||:||:|:..:..
  Rat   265 SCKTEKHAKLALYFNLLGLWIIVVCAVFCGLIMYAYYKDCDPWTSGAILAPDQLMPYFVMEIFAT 329

  Fly   419 ISSVAGIFVAGIFAASLGTVASALNSLSAVTCEDLLVNGMNIKISPEKGATYAKWMSLG----FG 479
            :..:.|:|||..|:.:|.|||:::|:|:.||.||.:.:     ..|....|.:.|:|.|    ||
  Rat   330 MPGLPGLFVACAFSGTLSTVAASINALATVTFEDFVKS-----CFPHLSDTLSTWISKGLCLLFG 389

  Fly   480 IASFGLVFIVEHLGGVLQATLTLNGLIGGVTLGLFVLGIACKQANTKGAFYGGLLSLALVIFVGV 544
            |....:..:...:|.|:||.|:::|:.||..||||.||:.....|.|||..|.|..:.|..:||:
  Rat   390 IICTSMAVLASLMGSVVQAALSIHGMCGGPMLGLFTLGLVFPFVNWKGALGGLLTGITLSFWVGI 454

  Fly   545 VAQIVSVEQPA-------LPTSIDKCDCHVNMTNIIGSLLTEPLEVIEEGGFTSWPIFRLSYMWY 602
            .|.:    .||       ||.|.:.|......|.....|.:.|  |:.:    :|  :.|||:::
  Rat   455 GAFV----YPAPDSKTLPLPLSTEFCVQQNKTTTEAYQLSSRP--VLAD----TW--YSLSYLYF 507

  Fly   603 SMIGCLLTVFLGWFISLIIDFIQRRNVLKITGKDID 638
            |.:|||..:..|    :||.|:..|.    .|||:|
  Rat   508 SAVGCLGCIAAG----IIISFLTGRQ----RGKDVD 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5687NP_647678.3 SLC5sbd_NIS-SMVT 99..620 CDD:271383 190/532 (36%)
Slc5a12NP_001102058.1 SLC5sbd_SMCT2 3..527 CDD:212089 194/542 (36%)

Return to query results.
Submit another query.