DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5687 and Slc5a4b

DIOPT Version :9

Sequence 1:NP_001286910.1 Gene:CG5687 / 38255 FlyBaseID:FBgn0035293 Length:683 Species:Drosophila melanogaster
Sequence 2:XP_008771154.1 Gene:Slc5a4b / 294342 RGDID:1309867 Length:660 Species:Rattus norvegicus


Alignment Length:620 Identity:143/620 - (23%)
Similarity:257/620 - (41%) Gaps:134/620 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 RGESPSESQEHVEFDNAATLLLRAFKNQQIPASAELEECSAPSHKATFSGYDYVILLGMLVISLG 113
            |.|.|.|..|.::  |||.:                                .||::..||: |.
  Rat    12 RTEEPPEVSERIQ--NAADI--------------------------------SVIVIYFLVV-LA 41

  Fly   114 IGIFYGFFQKGGSSSNEFLLGSEMSIFPVTLSLTTSFITAIELLGNPSEMYFQGTQFVLIVIPMV 178
            :|::.......|:....||.|.::|.:|:..||..|.|.:...:|........|.....:....:
  Rat    42 VGLWSMVRSNRGTIGGFFLAGRDVSWWPMGASLFASNIGSNHFVGLAGTGAASGIAIAAVEWNAL 106

  Fly   179 IVIPVAVKIFYPIYFKMELTSCYEYLGIRF-GKEIRILGAVLYV-IQMCFYTAVAVLAPAIALSK 241
            :::.|...:|.|||.|..:|:..|||..|| ||.::|..:||.: |.:...|:..:.:.||.:..
  Rat   107 LMVLVLGWVFVPIYIKAGVTTMPEYLRKRFGGKRLQIYLSVLSLFIMVAIQTSSTIFSGAIFIQL 171

  Fly   242 ATGLDTKIAVVLIYVVCVFYSSQGGMKAVVIADSFQAAVLAVSLVLIVG-----LGCF--YSGNP 299
            |.||:..:||.::..:..||:..||:.:|:..||.|..::.|..::::|     :|.:  ::...
  Rat   172 ALGLNLYLAVFILLAITAFYTVAGGLASVIYTDSVQTFIMLVGSLILMGFAFAEVGGYESFTEKY 236

  Fly   300 IQVFQTASDHNRL-----------EFFNMDPDPTTRHTVWSVVIGG-----FFYWTSLFCTNQAS 348
            :....:..:.:.|           :.|::..||......|..:|.|     .:||    |.:|..
  Rat   237 MNAIPSVVEGDNLTISPKCYTPQPDSFHIFRDPINGDIPWPGLIFGMTILAIWYW----CADQVM 297

  Fly   349 VQKCM---SLKSLRLAKIALGFAIIGLIVVFLL--------NFYTGLMVFTHYADCDPLTAGRIS 402
            ||:|:   ::..::.|.|..|:  :.|:.:||:        ..||..:.....::|.......:.
  Rat   298 VQRCLCGKNMSHVKAACIMCGY--LKLLPMFLMVMPGMISRILYTDKVACVVPSECVKQCGTAVG 360

  Fly   403 ATDQLLPYYVINTYEHISSVAGIFVAGIFAASLGTVASALNSLSAVTCEDLLVNGMNIKISPEKG 467
            .|:...|..|:....  ..:.|:.::.:.|:.:.::.|..||.|.:...||..     ||  .|.
  Rat   361 CTNYAYPTLVLELMP--DGLRGLMLSVMLASLMSSLTSIFNSASTLFTMDLYT-----KI--RKK 416

  Fly   468 ATYAKWMSLGFGIASFGLVFIVEHL-----------GGVLQATLTLNGLIGGVTLGLFVLGIACK 521
            |:..:.|..|   ..||:|.||..:           |.:.....:.:..||.....:|:|.|.||
  Rat   417 ASERELMVAG---RVFGIVLIVISILWVPLIQASQNGQLFHYISSFSSYIGPPVGAVFLLAIFCK 478

  Fly   522 QANTKGAFYGGLLSLALVIFVGVVAQIVS--------VEQPALPTSIDKCDCH----------VN 568
            :.|.:|||:|  |.:.|||  |::..|..        :|....|..|  |..|          |:
  Rat   479 RVNEQGAFWG--LMVGLVI--GLIRMITEFIYGTGSCLEPSNCPRII--CGVHYMYFAIILFFVS 537

  Fly   569 MTNIIG-SLLTEPLEVIEEGGFTSWPIFRLSY-MW 601
            :..|:| |.||||:..:.        ::||.: :|
  Rat   538 ILVILGVSFLTEPIPDVH--------LYRLCWSLW 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5687NP_001286910.1 SLC5sbd_NIS-SMVT 99..620 CDD:271383 135/570 (24%)
Slc5a4bXP_008771154.1 SLC5-6-like_sbd 27..660 CDD:294310 136/603 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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