DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbx and Nkx6-1

DIOPT Version :10

Sequence 1:NP_647677.2 Gene:Dbx / 38254 FlyBaseID:FBgn0261723 Length:741 Species:Drosophila melanogaster
Sequence 2:NP_113925.1 Gene:Nkx6-1 / 65193 RGDID:69318 Length:365 Species:Rattus norvegicus


Alignment Length:351 Identity:89/351 - (25%)
Similarity:121/351 - (34%) Gaps:93/351 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 AFLTHQLPPHQHHQQQQHVQQQHP--------GNSCQPQTASSSSSPGSTISDSDNNHGASTANG 301
            |||....|....|...:.....:|        |......::||||||...:...:.......|.|
  Rat    14 AFLLSSPPLAALHSMAEMKTPLYPAAYPPLPTGPPSSSSSSSSSSSPSPPLGAHNPGGLKPPAAG 78

  Fly   302 NGSGTGNSGQD---ARPH-----------------ELANSNP---DEDSSASRRLTQDKQQQQQL 343
            ..|..|:..|.   |.||                 .|.:::|   ...||:|...|.........
  Rat    79 GLSSLGSPPQQLSAATPHGINDILSRPSMPVASGAALPSASPSGSSSSSSSSASATSASAAAAAA 143

  Fly   344 LGAGGTGGGGGGGHGHGHP-----TPPPPPP-----PPVIA--------KP---MPSRPTPFLPH 387
            ..|.........|...|.|     :||||||     |...|        ||   :|.|...|.|.
  Rat   144 AAAAAAAASSPAGLLAGLPRFSSLSPPPPPPGLYFSPSAAAVAAVGRYPKPLAELPGRTPIFWPG 208

  Fly   388 TLNHPHLHSLLAHCRNPYMSVGAQVFPLPPGQGFPWAHSTRG-KPRRGMM----------RRAVF 441
            .:..|                             ||..:... .|.:|.:          .|..|
  Rat   209 VMQSP-----------------------------PWRDARLACTPHQGSILLDKDGKRKHTRPTF 244

  Fly   442 SDSQRKGLEKRFQQQKYISKPDRKKLAERLGLKDSQVKIWFQNRRMKWRNSKERELLASGGSRD- 505
            |..|...|||.|:|.||::.|:|.:||..||:.:||||:||||||.|||.....|:..:...:| 
  Rat   245 SGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEMATAKKKQDS 309

  Fly   506 QTLPNKNNPNPDLSDAKCDRPLTPLS 531
            :|...|.....:..|...::||.|.|
  Rat   310 ETERLKGTSENEEDDDDYNKPLDPNS 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DbxNP_647677.2 Homeodomain 437..491 CDD:459649 29/53 (55%)
Nkx6-1NP_113925.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 35..136 22/100 (22%)
Repressor domain. /evidence=ECO:0000250 102..269 42/195 (22%)
Homeodomain 236..294 CDD:459649 29/57 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 295..365 9/41 (22%)
Involved in DNA-binding. /evidence=ECO:0000250 307..365 8/29 (28%)

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