DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbx and Lbx1

DIOPT Version :10

Sequence 1:NP_647677.2 Gene:Dbx / 38254 FlyBaseID:FBgn0261723 Length:741 Species:Drosophila melanogaster
Sequence 2:NP_001040573.1 Gene:Lbx1 / 499362 RGDID:1564197 Length:285 Species:Rattus norvegicus


Alignment Length:290 Identity:77/290 - (26%)
Similarity:104/290 - (35%) Gaps:101/290 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   368 PPPPVIAKPMPSRPTPF-LPHTLNHPHLHSLLAHCRNPYMSVGAQVFPLPPGQGFPWA------- 424
            |||....||:    ||| :...||.|.:....:.|...::...|...  .|| |.|.|       
  Rat    24 PPPANSNKPL----TPFSIEDILNKPSVRRSYSLCGAAHLLAAADKH--APG-GLPLAGRALLSQ 81

  Fly   425 ----------------------------------HSTRGKPRRGMMRRAVFSDSQRKGLEKRFQQ 455
                                              ...|..|::....|..|::.|...|||||..
  Rat    82 TSPLCALEELASKTFKGLEVSVLQAAEGRDGMTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLY 146

  Fly   456 QKYISKPDRKKLAERLGLKDSQVKIWFQNRRMKWRNSKERELLASGGSRDQTLPNKNNPNPDLSD 520
            |||:|..||.::|::|||.::||..||||||.|.:...| |:.|                 |:..
  Rat   147 QKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLE-EMKA-----------------DVES 193

  Fly   521 AKCDRPLTPLSPS---------LLSPNGSATPPPPG------AVAKDEPPTAAVTPKSPQSVSSR 570
            ||      .|.||         .|..|..|:....|      ..||..|.:.|:.|.:||:..  
  Rat   194 AK------KLGPSGQMDIVALAELEQNSEASGGGGGGGGGGCGRAKSRPGSPALPPGAPQAPG-- 250

  Fly   571 SSPSVGYGLQISSPPPLLTSLKMGDQSASA 600
                 |..||:|...||.      ||.||:
  Rat   251 -----GGPLQLSPASPLT------DQRASS 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DbxNP_647677.2 Homeodomain 437..491 CDD:459649 27/53 (51%)
Lbx1NP_001040573.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36 6/15 (40%)
Homeodomain 126..182 CDD:459649 27/55 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..285 20/71 (28%)

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