Protein Alignment Dbx and cdx1a

DIOPT Version :10

• Sequence 1: NP_647677.2
• Gene: Dbx / 38254
• FlyBaseID: FBgn0261723
• Length: 741
• Species: Drosophila melanogaster
• Sequence 2: NP_998001.2
• Gene: cdx1a / 405762
• ZFINID: ZDB-GENE-050510-1
• Length: 228
• Species: Danio rerio
• Alignment Length: 162
• Identity: 50/162 - (30%)
• Similarity: 64/162 - (39%)
• Gaps: 32/162 - (19%)

  Fly   345 GAGGTGGGGGG---------GHGHGHPTPPPPPPPPVIAKPMPSRPTPFLPHTLNHPHLHSLLAH 400
            |:..:.|.|.|         |||.||..    |...|....:||         ::...|......
Zfish    54 GSSWSPGFGPGSRDDWPPLYGHGTGHSL----PANGVEVSVLPS---------VDQGLLSGAPVD 105

  Fly   401 CRNPYMSVGAQVFPLPPGQGFPWAHSTRGKPRRGMMRRAVFSDSQRKGLEKRFQQQKYISKPDRK 465
            ...|...:.....|..||          ||.|.....|.|:||.||..|||.|...:||:...:.
Zfish   106 REEPQDWMRRSAVPTNPG----------GKTRTKDKYRVVYSDVQRLELEKEFHFSRYITIRRKA 160

  Fly   466 KLAERLGLKDSQVKIWFQNRRMKWRNSKEREL 497
            :||..|.|.:.||||||||||.|.|...::.|
Zfish   161 ELAGTLNLSERQVKIWFQNRRAKERKMNKKRL 192

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dbx	NP_647677.2	Homeodomain	437..491	CDD:459649	27/53 (51%)
cdx1a	NP_998001.2	Caudal_act	11..123	CDD:461413	16/81 (20%)
		Homeodomain	131..186	CDD:459649	27/54 (50%)