DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbx and scro

DIOPT Version :10

Sequence 1:NP_647677.2 Gene:Dbx / 38254 FlyBaseID:FBgn0261723 Length:741 Species:Drosophila melanogaster
Sequence 2:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster


Alignment Length:450 Identity:107/450 - (23%)
Similarity:154/450 - (34%) Gaps:132/450 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 AVPGHQHSHPHSHH----HHHHHPGAGHAHFPHPAFLTHQLPPHQHHQQQQHVQQQHPGNSCQPQ 275
            ||..|.|:....||    |..|.....:::...|..:|..|.|.:...::..:....|.......
  Fly    82 AVAHHHHNLSSIHHLQNLHSQHQSTLFNSNHSTPFSVTDILSPIEESYRKLELNGNPPSPFRSNS 146

  Fly   276 TASSSSSPGSTISDSDNNHGASTANGNGSGTGNSGQDARPH-------ELANSNPDEDSSASRRL 333
            ::||.:||| |::.|      :.||....||.......:.:       .||....|..:|||   
  Fly   147 SSSSINSPG-TLTTS------TMANPYAMGTLYHSPGVQTYCGPTDNLSLAGHYTDMRNSAS--- 201

  Fly   334 TQDKQQQQQLLGAGGTGGGGGGGHGHGHPTPPPPPPPPVIAKPMPSRPTPFLPHTLNHPHLHSLL 398
                       ..|.|..                .|...|::.|.|..:    .|::|....|.|
  Fly   202 -----------WYGSTAN----------------DPRFAISRLMSSSAS----GTMSHMGNMSGL 235

  Fly   399 AHCRNPYMSVGAQVFPLPPGQGFPWAHSTRGKPRRGMMRRAVFSDSQRKGLEKRFQQQKYISKPD 463
            |.|         .|....|.| ||.|...:        ||.:|:.:|...||:||:||:|:|.|:
  Fly   236 AAC---------SVSDSKPLQ-FPLAQRRK--------RRVLFTQAQVYELERRFKQQRYLSAPE 282

  Fly   464 RKKLAERLGLKDSQVKIWFQNRRMKWRNSKERELLASGGSRDQTLPNKNNPNPDLSDAKCDRPLT 528
            |:.||..:.|..:||||||||.|.|.:...:.:.:|.....:|                      
  Fly   283 REHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQ---------------------- 325

  Fly   529 PLSPSLLSPNGSATPPPPGAVAKDEPPTAAVTPKSPQSVSSRSSPSVGYG--------------- 578
            |.|    ||...|.|    .:.||..|.:.....|.......:|.|.|..               
  Fly   326 PAS----SPRRVAVP----VLVKDGKPCSGNNSSSQSQQHGTNSTSAGNNTGSANNGNANSGIVS 382

  Fly   579 --LQISSPPPLLTSLKMGDQSASATPTPLPGTTVSSAAASPPGVTASEFQAKINAEMQKQ 636
              ..:|....|:|    ||...|.:|     .|.||..||...|..|      |..|.:|
  Fly   383 VTANVSGGLNLIT----GDAPNSHSP-----DTSSSLLASYGTVGGS------NVAMLQQ 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DbxNP_647677.2 Homeodomain 437..491 CDD:459649 27/53 (51%)
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 27/63 (43%)

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