DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbx and hoxd8

DIOPT Version :10

Sequence 1:NP_647677.2 Gene:Dbx / 38254 FlyBaseID:FBgn0261723 Length:741 Species:Drosophila melanogaster
Sequence 2:NP_001135589.1 Gene:hoxd8 / 100216142 XenbaseID:XB-GENE-920113 Length:231 Species:Xenopus tropicalis


Alignment Length:195 Identity:62/195 - (31%)
Similarity:89/195 - (45%) Gaps:39/195 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 QLLGAG-------GTGGGGGGGHGHGHPTPPPPPPPPVIAKPMPSRPT----PFLPHTLNH-PHL 394
            |.:|:|       |:|.|....:.| ||...|.|.    .:|.|...|    |...:..:| ...
 Frog    28 QEVGSGRAPLVYSGSGSGAPQDYYH-HPGTLPSPG----YQPAPCGITCHGDPAKLYGYDHFQRQ 87

  Fly   395 HSLLAH----------CRNPYMSVGAQVFPL----PPGQGFPW--AHSTRGKPRRGMMRRAVFSD 443
            |....|          |::|..|:||....|    |....|||  |....|: |||   |..:|.
 Frog    88 HIFTTHQEAEPVQYPDCKSPSASIGADPEHLHQNSPASHMFPWMRAQVAPGR-RRG---RQTYSR 148

  Fly   444 SQRKGLEKRFQQQKYISKPDRKKLAERLGLKDSQVKIWFQNRRMKWR--NSKERELLASGGSRDQ 506
            .|...|||.|....|:::..|.:::..|||.:.|||||||||||||:  |||::..::|...:::
 Frog   149 FQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENSKDKFPVSSQEGKEE 213

  Fly   507  506
             Frog   214  213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DbxNP_647677.2 Homeodomain 437..491 CDD:459649 25/55 (45%)
hoxd8NP_001135589.1 Homeodomain 140..196 CDD:459649 28/58 (48%)

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