DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsb and scarb2b

DIOPT Version :9

Sequence 1:NP_001097477.1 Gene:dsb / 38252 FlyBaseID:FBgn0035290 Length:615 Species:Drosophila melanogaster
Sequence 2:XP_009299911.1 Gene:scarb2b / 564077 ZFINID:ZDB-GENE-170406-1 Length:523 Species:Danio rerio


Alignment Length:484 Identity:143/484 - (29%)
Similarity:234/484 - (48%) Gaps:43/484 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 GIITLILGIILSSMPWLDYFI----LKNLRLWNDTLSYHYWQRPGVIRLTKLYIYNVTNPDGFLR 146
            |.:.|:.||.|.:.......|    .|.:.|...:..:..|:.|......:.:.:|||||:.||:
Zfish    15 GALLLLAGIALFASGLFQTLIHNKLKKEITLTEGSKVFATWKNPPPPVYMEFFFFNVTNPEAFLK 79

  Fly   147 GE-KPHLQEVGPFVYREDMQKVNVKFHENNYTVSYQHKKILQFVPELSIDKDT--PITTPNIPLL 208
            || |..|.|:||:.|||...|.||.|.:|...|:....|:..||||.|:...:  .:||.|||.:
Zfish    80 GEAKARLSEMGPYTYREYRPKHNVSFVDNGTKVAAYTPKVFVFVPEKSVGDPSVDMVTTVNIPAV 144

  Fly   209 TLTSLSPKLGYLLSKTISVVVTAAQFKPFINVTAEQLAFGYDDALVSLAHRFYPKHMRPMERMGL 273
            .:.:.....|:|:|..:|:.:.:...:.|:..|.::|.:|:.|.|::......|:   ..|..||
Zfish   145 AVMNRIKGAGFLVSSAMSLYMKSIGAEMFMTHTVDELLWGFKDPLLTKLRSIKPE---TDEFFGL 206

  Fly   274 LLGRNGTLTEVSSVKTGMDSMDQFGYIDQLNGLDHLPHWSEPPCTSIAGSEGSFFPPRELTKSEV 338
            :|.:||:........||..:...:|.|....|...:..|.......|.|::||.|.| .|||.|.
Zfish   207 MLHKNGSDDGEFVYHTGEHNYLDYGRIFTWKGEKLMSFWKTNQSNMINGTDGSAFHP-FLTKEER 270

  Fly   339 VHIYDKDLCRIIPLKYVESLEKDGIAADLFRLPNNSYGDSAHNPEN--------KCYDTSEYEPI 395
            :.::..||||.|.:::.:.:|..||.|..|..|........:||||        ||.|       
Zfish   271 LDVFTADLCRSIHMRFEKEVEVKGIPAYRFTPPRAVLASGTNNPENEGFCLTPKKCLD------- 328

  Fly   396 QGLQNISPCQYGAPVYISNPHFFESHPDLLNSVEGLKPEREKHETYFKIQPKLGVPLEGKVRIQL 460
            .|:.::|.|:.||||.:|.|||.......:.:||||.|..|:|:|:..:.|.:|||:....|.|:
Zfish   329 DGVLDVSVCRQGAPVVVSFPHFHLGDEKYVQAVEGLSPVHEQHQTFLDLNPTMGVPVRAMKRAQI 393

  Fly   461 NLKVTRAKDVYPVRDFRDFVFPVMWLEEGI---SELTPAIKRWIYLGTVIAP---SAVPIGSYLM 519
            |:.:.|.......|:....:||:::|.|.:   :.....|::.:.:.|:::.   ..|.:|..|:
Zfish   394 NIHLERVTGFPMTRNLESTIFPIIFLNESVVIDNASAERIQKLLLVVTLVSHFPLILVALGVILL 458

  Fly   520 ILGGAFAIIFSFVRAYQN------FMFAQ 542
            |:    |:|.: ||.|||      |.||:
Zfish   459 IV----AVILA-VRYYQNKTEVKRFDFAE 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsbNP_001097477.1 CD36 103..532 CDD:279474 130/449 (29%)
scarb2bXP_009299911.1 CD36 30..463 CDD:279474 129/447 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 1 1.000 - - FOG0000618
OrthoInspector 1 1.000 - - mtm6350
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
88.030

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