DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsb and scarb2

DIOPT Version :10

Sequence 1:NP_001097477.1 Gene:dsb / 38252 FlyBaseID:FBgn0035290 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_001016557.1 Gene:scarb2 / 549311 XenbaseID:XB-GENE-948022 Length:483 Species:Xenopus tropicalis


Alignment Length:464 Identity:141/464 - (30%)
Similarity:231/464 - (49%) Gaps:23/464 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 IGIITLILGIIL----SSMPWLDYFILKNLRLWNDTLSYHYWQRPGVIRLTKLYIYNVTNPDGFL 145
            :.:..||:.|:|    :.|..::..:.:.:.|.|::..:..|..|......:.|.:|||||...|
 Frog    12 VSVTLLIVSIVLLLTHTFMDIVEGQVKQAIVLKNESEVFEDWANPPPPVYMQFYFFNVTNPLEVL 76

  Fly   146 RGEKPHLQEVGPFVYREDMQKVNVKFHENNYTVSYQHKKILQFVPELSI--DKDTPITTPNIPLL 208
            .||||.:.|:||:.|||...:.|:.|..|...||....|...|.||.||  .|...|.|.||||:
 Frog    77 SGEKPFVDEIGPYTYREYRPRENITFSVNGTEVSAVTPKTYVFEPEKSIGDPKVDLIRTVNIPLV 141

  Fly   209 TLTSLSPKLGYLLSKTISVVVTAAQFKPFINVTAEQLAFGYDDALVSLAHRFYPKHMRPMERMGL 273
            |:..:: |...||...|...:...:...|:..|.::|.:||.||::|:.|.| .|::  .:..||
 Frog   142 TILEMT-KDSSLLRPFIIAALKTYKEGMFVTRTVDELLWGYKDAVLSILHPF-KKNI--SDTFGL 202

  Fly   274 LLGRNGTLTEVSSVKTGMDSMDQFGYIDQLNGLDHLPHWSEPPCTSIAGSEGSFFPPRELTKSEV 338
            ....|.|........:|.....:|..|.:..|...|..|:...|..|.|::|:.|.|. |.|.:.
 Frog   203 FYKMNTTDDGEYIFLSGEKDYLEFTQIAEWKGQKALNWWTTETCNMINGTDGTSFHPL-LNKDDT 266

  Fly   339 VHIYDKDLCRIIPLKYVESLEKDGIAADLFRLPNNSYGDSAHNPENK--CYDTSEYEPIQGLQNI 401
            ::::..||||.|...|..|.....|:...|..|.:.:.:.:.||:||  |.......| .||.|:
 Frog   267 IYMFSSDLCRSIYAVYESSENIKDISVFRFSPPASVFANVSVNPQNKGFCVPEGNCLP-SGLLNV 330

  Fly   402 SPCQYGAPVYISNPHFFESHPDLLNSVEGLKPEREKHETYFKIQPKLGVPLEGKVRIQLNLKVTR 466
            |.|:.|||:.:|:|||:::..:::||:.|:||.:|.|.|:..:.|..|..::...|||:|:.| |
 Frog   331 SICKEGAPIVLSSPHFYQADENVINSIRGMKPVKEHHMTFLDLNPLTGTLIQAAKRIQVNVYV-R 394

  Fly   467 AKDVYPV-RDFRDFVFPVMWLEEGI---SELTPAIKRWIYLGTVIAPSAVPIGSYLMILGGAFAI 527
            ..:||.: :|.:...||||.|.|.:   .:....::..::.|.|:|  .:|.  .:|.||...|.
 Frog   395 KINVYLITQDIQTLFFPVMHLNESVLIDDKSAGRLRSILFQGRVVA--NIPF--IIMGLGIILAF 455

  Fly   528 IFSFVRAYQ 536
            :|:.:...|
 Frog   456 LFTTLSCLQ 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsbNP_001097477.1 CD36 103..534 CDD:460076 135/438 (31%)
scarb2NP_001016557.1 CD36 29..460 CDD:460076 136/441 (31%)

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