DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsb and scarb2

DIOPT Version :9

Sequence 1:NP_001097477.1 Gene:dsb / 38252 FlyBaseID:FBgn0035290 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_001016557.1 Gene:scarb2 / 549311 XenbaseID:XB-GENE-948022 Length:483 Species:Xenopus tropicalis


Alignment Length:464 Identity:141/464 - (30%)
Similarity:231/464 - (49%) Gaps:23/464 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 IGIITLILGIIL----SSMPWLDYFILKNLRLWNDTLSYHYWQRPGVIRLTKLYIYNVTNPDGFL 145
            :.:..||:.|:|    :.|..::..:.:.:.|.|::..:..|..|......:.|.:|||||...|
 Frog    12 VSVTLLIVSIVLLLTHTFMDIVEGQVKQAIVLKNESEVFEDWANPPPPVYMQFYFFNVTNPLEVL 76

  Fly   146 RGEKPHLQEVGPFVYREDMQKVNVKFHENNYTVSYQHKKILQFVPELSI--DKDTPITTPNIPLL 208
            .||||.:.|:||:.|||...:.|:.|..|...||....|...|.||.||  .|...|.|.||||:
 Frog    77 SGEKPFVDEIGPYTYREYRPRENITFSVNGTEVSAVTPKTYVFEPEKSIGDPKVDLIRTVNIPLV 141

  Fly   209 TLTSLSPKLGYLLSKTISVVVTAAQFKPFINVTAEQLAFGYDDALVSLAHRFYPKHMRPMERMGL 273
            |:..:: |...||...|...:...:...|:..|.::|.:||.||::|:.|.| .|::  .:..||
 Frog   142 TILEMT-KDSSLLRPFIIAALKTYKEGMFVTRTVDELLWGYKDAVLSILHPF-KKNI--SDTFGL 202

  Fly   274 LLGRNGTLTEVSSVKTGMDSMDQFGYIDQLNGLDHLPHWSEPPCTSIAGSEGSFFPPRELTKSEV 338
            ....|.|........:|.....:|..|.:..|...|..|:...|..|.|::|:.|.|. |.|.:.
 Frog   203 FYKMNTTDDGEYIFLSGEKDYLEFTQIAEWKGQKALNWWTTETCNMINGTDGTSFHPL-LNKDDT 266

  Fly   339 VHIYDKDLCRIIPLKYVESLEKDGIAADLFRLPNNSYGDSAHNPENK--CYDTSEYEPIQGLQNI 401
            ::::..||||.|...|..|.....|:...|..|.:.:.:.:.||:||  |.......| .||.|:
 Frog   267 IYMFSSDLCRSIYAVYESSENIKDISVFRFSPPASVFANVSVNPQNKGFCVPEGNCLP-SGLLNV 330

  Fly   402 SPCQYGAPVYISNPHFFESHPDLLNSVEGLKPEREKHETYFKIQPKLGVPLEGKVRIQLNLKVTR 466
            |.|:.|||:.:|:|||:::..:::||:.|:||.:|.|.|:..:.|..|..::...|||:|:.| |
 Frog   331 SICKEGAPIVLSSPHFYQADENVINSIRGMKPVKEHHMTFLDLNPLTGTLIQAAKRIQVNVYV-R 394

  Fly   467 AKDVYPV-RDFRDFVFPVMWLEEGI---SELTPAIKRWIYLGTVIAPSAVPIGSYLMILGGAFAI 527
            ..:||.: :|.:...||||.|.|.:   .:....::..::.|.|:|  .:|.  .:|.||...|.
 Frog   395 KINVYLITQDIQTLFFPVMHLNESVLIDDKSAGRLRSILFQGRVVA--NIPF--IIMGLGIILAF 455

  Fly   528 IFSFVRAYQ 536
            :|:.:...|
 Frog   456 LFTTLSCLQ 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsbNP_001097477.1 CD36 103..532 CDD:279474 135/436 (31%)
scarb2NP_001016557.1 CD36 29..460 CDD:366481 136/441 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 1 1.000 - - FOG0000618
OrthoInspector 1 1.000 - - mtm9474
Panther 1 1.100 - - O PTHR11923
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.110

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