DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsb and scarb2c

DIOPT Version :9

Sequence 1:NP_001097477.1 Gene:dsb / 38252 FlyBaseID:FBgn0035290 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_001352071.1 Gene:scarb2c / 337532 ZFINID:ZDB-GENE-030131-5789 Length:478 Species:Danio rerio


Alignment Length:479 Identity:132/479 - (27%)
Similarity:224/479 - (46%) Gaps:37/479 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 IITLILGIILSSMPWLDYFILKNLR----LWNDTLSYHYWQRPGVIRLTKLYIYNVTNPDGFLRG 147
            ::.||.||.|.....|...:...::    |.|.|.::..||.|......:.|.:|:|||...:.|
Zfish    16 VLLLICGIALELTRVLQKLVNNTVKQQIVLENGTEAFSVWQNPPPPVYMQFYFFNLTNPAEVMSG 80

  Fly   148 EKPHLQEVGPFVYREDMQKVNVKFHENNYTVSYQHKKILQFVPELSI-DKDTPITTPNIPLLTLT 211
            :||.:.::||:.|||......|||.:|...|:..:.|...|.|.:|. .:|..:.|.|||.:|: 
Zfish    81 DKPSVVQIGPYTYREYRPMEEVKFMDNGTRVAAINPKTYVFEPNMSRGSQDDLVRTVNIPAVTV- 144

  Fly   212 SLSPKLGYLLSKTISVVVTAAQFKPFINVTAEQLAFGYDDALVSLAHRFYPKHMRPMERMGLLLG 276
             :......:|::.||.::.|.....|.......|.:||:|.|:...|...|.     :..||...
Zfish   145 -MEKYKDSILARLISDLMKAKGVGVFETFRVGDLLWGYEDPLLKELHMLVPD-----DHFGLFYK 203

  Fly   277 RNGTLTEVSSVKTGMDSMDQFGYIDQLNGLDHLPHWSEPPCTSIAGSEGSFFPPRELTKSEVVHI 341
            :|||..:...:.||......|..||:.||...|..||...|..|.|::|:.|.| .:||::.::|
Zfish   204 KNGTEYDSYVLLTGKPDYQDFASIDEWNGQRSLNWWSSEECNMINGTDGASFHP-IITKADRLYI 267

  Fly   342 YDKDLCRIIPLKYVESLEKDGIAADLFRLPNNSYGDSAHNPEN--------KCYDTSEYEPIQGL 398
            :..||||.:.::|...:...|:....|..|.:.:.....||:|        .|..:       ||
Zfish   268 FSSDLCRSLYVQYECDVSVQGVPGFRFVPPADVFSSPDINPDNAGFCVPPGHCLGS-------GL 325

  Fly   399 QNISPCQYGAPVYISNPHFFESHPDLLNSVEGLKPEREKHETYFKIQPKLGVPLEGKVRIQLNLK 463
            .|.|.|:.|||:.:|:|||:::....::.:.|:||.:|:|:|:..|.|..|:.|:|..|:|:|:.
Zfish   326 LNASVCKQGAPIIMSSPHFYQADQKFVDDIWGMKPIKEEHQTFADINPLTGIVLQGAKRVQVNVY 390

  Fly   464 VTRAKDVYPVRDFRDFVFPVMWLEEGISELTPAIKRWIYLGTVIAPSAVPIGSYLMIL--GGAFA 526
            :.:..........:..|||||::.|.......:.|:   |..|:..:.|.|....:::  |....
Zfish   391 LQQHSSFSQTGKIQTLVFPVMYINESAFIDEESAKK---LHAVVLNANVVINIPFIVISVGILLG 452

  Fly   527 IIFSFVRAYQNF----MFAQDPTL 546
            |||..:...|..    :..::|.|
Zfish   453 IIFIVLMCRQQMPPSTLAEREPLL 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsbNP_001097477.1 CD36 103..532 CDD:279474 123/443 (28%)
scarb2cNP_001352071.1 CD36 15..457 CDD:307331 129/458 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 1 1.000 - - FOG0000618
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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