DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsb and Scarb1

DIOPT Version :9

Sequence 1:NP_001097477.1 Gene:dsb / 38252 FlyBaseID:FBgn0035290 Length:615 Species:Drosophila melanogaster
Sequence 2:XP_038945027.1 Gene:Scarb1 / 25073 RGDID:2302 Length:516 Species:Rattus norvegicus


Alignment Length:311 Identity:87/311 - (27%)
Similarity:157/311 - (50%) Gaps:25/311 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 VVTAAQFKPFINVTAEQLAFGYDDALVSLAHRFYPKHMRPME-RMGLLLGRNGTLTEVSSVKTGM 291
            :||..| :.|:|.|..::.:||:|..|:...:::| .|.|:: :.||.:|.|.:.:.|.:|.||:
  Rat   170 LVTMGQ-RAFMNRTVGEILWGYEDPFVNFLSKYFP-DMFPIKGKFGLFVGMNDSSSGVFTVFTGV 232

  Fly   292 DSMDQFGYIDQLNGLDHLPHWSEPPCTSIAGSEGSFFPPRELTKSEVVHIYDKDLCRIIPLKYVE 356
            .:..:...:|:.|||..:.:|....|..|.|:.|..:.| .:|....:..:..:.||.:.|.|.|
  Rat   233 QNFSKIHLVDKWNGLSEVNYWHSEQCNMINGTAGQMWAP-FMTPESSLEFFSPEACRSMKLTYQE 296

  Fly   357 SLEKDGIAADLFRLPNNSYGDSAHNPENK----CYDTSEYEPIQGLQNISPCQYGAPVYISNPHF 417
            |...:||....|..|:..:.:.:..|.|:    |.::       |:||:|.|::|||:::|.|||
  Rat   297 SRVFEGIPTYRFTAPDTLFANGSVYPPNEGFCPCRES-------GIQNVSTCRFGAPLFLSQPHF 354

  Fly   418 FESHPDLLNSVEGLKPEREKHETYFKIQPKLGVPLEGKVRIQLNLKVTRAKDVYPVRDFRDFVFP 482
            :.:.|.|..:|.||.|:.::|..:..|.|..|:|:...|::||:|.:...|.|.........|.|
  Rat   355 YNADPVLSEAVLGLNPDPKEHSLFLDIHPVTGIPMNCSVKMQLSLYIKSVKGVGQTGKIEPVVLP 419

  Fly   483 VMWLEE----GISELTPAIKRWIYLGTVIAPSAVPIGSYLMI-LGGAFAII 528
            ::|.|:    |...|..     .|...|:.|..:....|::: |||...::
  Rat   420 LLWFEQSGMMGGKTLNT-----FYTQLVLMPQVLHYAQYVLLGLGGLLLLV 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsbNP_001097477.1 CD36 103..532 CDD:279474 87/311 (28%)
Scarb1XP_038945027.1 CD36 <148..454 CDD:395898 83/298 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342079
Domainoid 1 1.000 251 1.000 Domainoid score I2034
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 1 1.000 - - FOG0000618
OrthoInspector 1 1.000 - - mtm9056
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X155
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.860

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