DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsb and scav-6

DIOPT Version :9

Sequence 1:NP_001097477.1 Gene:dsb / 38252 FlyBaseID:FBgn0035290 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_492081.1 Gene:scav-6 / 184107 WormBaseID:WBGene00008542 Length:590 Species:Caenorhabditis elegans


Alignment Length:593 Identity:147/593 - (24%)
Similarity:248/593 - (41%) Gaps:129/593 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 GVRISNNRLAV--IIIGIITLILGIILSSMPWLDY------FILKNLRLW--NDT-LSYHYWQ-- 123
            |.||..|:|.|  ::|.|:.::.||:    .|..:      .::|||:|.  :|| |.|..:|  
 Worm     2 GFRIRINKLDVFLVVIAIVFIVFGIV----TWAAFSSIYSTLVIKNLQLTENSDTSLGYSAFQYT 62

  Fly   124 RPGVIRLTKLYIYNVTNPDGF-LRGEKPHLQEVGPFVYREDMQKVNVKFHENNYTVSYQHKKILQ 187
            .|.|..:.|.|.:||||||.. .....|:|.|:|||...|..||..::|.::...:.||:.|...
 Worm    63 SPQVDNIMKFYFFNVTNPDEVKYYSAAPNLVEIGPFSVMESEQKKYLEFSDDKSQMFYQNYKKYI 127

  Fly   188 FVPELS---IDKDTPITTPNIPLL--TLTSLSPKLGYLLSKT----ISVVVTAAQFKPFINVTAE 243
            ...:.|   .|.|..|..||.|.|  ..:.|.|:  :.::||    |:|.:|.....||::....
 Worm   128 LSKDYSCEDCDWDRNIVFPNPPGLGAVASMLDPQ--FQITKTGRTIIAVALTILGEYPFVSHKVR 190

  Fly   244 QLAF-GYDDALVSLAHRFY----------------PKHMRPMERMGLLLGRNGTLTEVSSVKTGM 291
            ::.| ||:|||:|.||..:                |..:..|.:.|...|.|.:..|...::||.
 Worm   191 EVLFDGYEDALLSAAHSGFVTVLSGIFKGDGGSIVPIPIPAMPKFGYFQGYNNSRDEEYWIETGK 255

  Fly   292 DSMDQFGYIDQLNGLDHLP--HWSEPPCTSIAGSEGSFFPPRELTKSEVVHIYDKDLCRIIPLKY 354
            ..::|.|.:.:..|:..||  .|:.|...||.||:...|....|.:|....::...:||.....:
 Worm   256 KDINQIGNVQRWAGITELPGEWWTTPKARSIRGSDSGSFTQMHLDESSTADMFFSFMCRSFTKTF 320

  Fly   355 -----VESLEKDG--IAADLF-RLPNNSYGDSAHN--------------PENKCYDTSEYEPIQG 397
                 :||:...|  |..|.: ...:|:.|....|              |:.:|:.:...:..:.
 Worm   321 YQRETIESIPTIGYHIGYDEWDTTSDNNVGFRYRNIEKRNYFPDWPKCPPKGQCHQSGSIDCSKS 385

  Fly   398 LQNISPCQYG----------------------------APVYISNPHFFESHPDLLNSVEGLKPE 434
            :.....|..|                            |.|| |.|||..|..::..:|.|:.|.
 Worm   386 INFCHACCDGSLYNGTYLLPPGMFPLVCYPGRLQPTPFAVVY-SPPHFLFSPDEVRTTVVGMAPN 449

  Fly   435 REKHE--TYFKIQPKLGVPLEGKVRIQLNLKVTRAKDVYPVRDFRDFVFPVMWLEEGISELTPAI 497
            :..||  .|:. :|..|..|:...|:|:|:.|.|:.||...::..:.:.|:.|     .:.:|..
 Worm   450 KSLHEPMIYYH-EPYSGTTLKVVNRLQVNMPVIRSHDVPSSQNMPNVMIPLFW-----QDTSPKY 508

  Fly   498 KRWIY----LGTVIAPSAVPIGSYLMI-LGGAFAIIFSFVRAYQNFMFAQDPTLEILEMGRRSLR 557
            .::|:    ||.|:.|..:.:..::.: :|.....|..|::               |..|:.||.
 Worm   509 HQFIFNEVWLGFVLVPRLMRVLQFVALGIGLLLVAIIVFLQ---------------LRKGKPSLI 558

  Fly   558 R--GSSFI 563
            |  .:||:
 Worm   559 RPLKTSFL 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsbNP_001097477.1 CD36 103..532 CDD:279474 128/525 (24%)
scav-6NP_492081.1 CD36 18..547 CDD:279474 132/541 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5605
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R16930
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.910

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