DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsb and scav-4

DIOPT Version :10

Sequence 1:NP_001097477.1 Gene:dsb / 38252 FlyBaseID:FBgn0035290 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_510157.2 Gene:scav-4 / 181429 WormBaseID:WBGene00008692 Length:560 Species:Caenorhabditis elegans


Alignment Length:581 Identity:136/581 - (23%)
Similarity:233/581 - (40%) Gaps:135/581 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 LAVIIIGIITLI--LGIILSSMPWLDYFILKNLRLWNDTLSY-------------HYWQRPGVIR 129
            :|:|:..:|.|:  |||.|     |..|.:...:...|:..|             .||.:...::
 Worm     5 VAIILAAVILLVFALGIFL-----LIPFPIAIFQSIVDSQVYLQQKSDGQLPTGTFYWSKIPAVQ 64

  Fly   130 LTKLYIYNVTNPDGFL-RGEKPHLQEVGPFVYREDMQKVNVKFHENNYTVSYQHKKILQFVPELS 193
            :...:::||||||..| .|..|::.|:||:.|.|...|...:|.:|:..:.|.:.|...:.|..|
 Worm    65 IWTFHLFNVTNPDEVLYYGATPNMLEIGPYTYTETEFKDFTQFRDNDNEIFYVNNKTWVYDPTRS 129

  Fly   194 IDKDTPIT-------TPNIPLLTLTSLSPKLGYLLSKTISVVVTAAQFKPFINVTAEQLAF-GYD 250
            .: |..::       |..:..:.:....| .|.::...:.|:......:|...|||....| ||:
 Worm   130 CE-DCKLSDSVQFANTAYMSTVFMQIYQP-AGPIVGFGLDVLTILLGEQPLRTVTAGGTLFDGYN 192

  Fly   251 DALVSLAHRFYPKHMRPMERMGL-LLGRNGTLTEVS----------------SVKTGMDSMDQFG 298
            |.|::|.:       .|:.::.| :||....|.:|.                :::||.|:.|..|
 Worm   193 DPLITLIN-------SPLVKVLLSVLGNPVQLPQVPAAGFFPHYSHTCDGNYTIRTGKDNTDYVG 250

  Fly   299 YIDQLNGLDHLPHWSEPPCTSIAGS-EGSFFPPRELTKSEVVHIYDKDLCRIIPLKYVESLEKDG 362
            .|...|||.|||.|.....:.:.|: :|:...| .:.|::.|..:...|||...|.|.||...:.
 Worm   251 QIKTWNGLTHLPWWKTEDTSDLRGTCDGTIQKP-GIQKTDTVVQFQSFLCRKYNLHYHESKTVNS 314

  Fly   363 IAADLFRLPNNSYGDSAHNPE-----------------------------------------NKC 386
            |....|::.::|| |:..||.                                         |.|
 Worm   315 IPTYGFKVEDDSY-DAIKNPGYRYENFEKVNYFPNWPCGLNHTKQNNGNCALVDCNQYDNFCNAC 378

  Fly   387 YDTSE----YEPIQGL-------QNISPCQYGAPVYISNPHFFESHPDLLNSVEGLKPEREKHET 440
            .|.|.    |....|:       ..:.|..:||  .:|.|||:.:...:..|:.|:.|:.|.|..
 Worm   379 CDGSHVNGTYVMPPGMVPQRCLPGQMVPTPFGA--ILSAPHFYGAPKVVTESMVGIHPDPELHRP 441

  Fly   441 -YFKIQPKLGVPLEGKVRIQLNLKVTRAKDVYPVRDFRDFVFPVMWLEEGISELTPAIKRWIYLG 504
             .|.|.|..|..:.|:.|:.|::.|.::.....:.:..:.:.|...|..|:.....|: .:||..
 Worm   442 GTFYINPATGSTIGGEFRMMLSIPVFQSLAWTLMSNAPNAIMPSFTLTIGVVMKDYAV-NYIYFN 505

  Fly   505 TVIAPSAVPIGSYLMILGGAFAII---------FSFVRAYQN---FMFAQ---DPTLEILE 550
            ||..|:.| :|     ||..|..:         |.:.|:.:|   |:..|   :||..:.|
 Worm   506 TVTIPNIV-LG-----LGIGFTAVSLIAVLLWGFCYFRSKRNAKPFVLQQHRTEPTWSVAE 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsbNP_001097477.1 CD36 103..534 CDD:460076 120/532 (23%)
scav-4NP_510157.2 CD36 14..535 CDD:460076 126/545 (23%)

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