DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsb and scav-1

DIOPT Version :10

Sequence 1:NP_001097477.1 Gene:dsb / 38252 FlyBaseID:FBgn0035290 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_508919.2 Gene:scav-1 / 180812 WormBaseID:WBGene00015389 Length:563 Species:Caenorhabditis elegans


Alignment Length:567 Identity:120/567 - (21%)
Similarity:215/567 - (37%) Gaps:133/567 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 ISNGVRISNNRLAVIIIGIITLILGIILSSMPWLDYF--ILKN---------------LRLWNDT 116
            :|.|:        :.:||...|:.|:::.    |:.|  |:.|               |..:.|:
 Worm    10 VSAGI--------IFLIGAALLVAGLVIV----LNVFPNIVNNQINDSKVLGLNADGTLNSFTDS 62

  Fly   117 LSYHYWQRPGVIRLTKLYIYNVTNPDGFL-RGEKPHLQEVGPFVYREDMQKVNVKFHENNYTVSY 180
                 |.....|...:.::|:.||..|.: |...|.::|.||:.:.|.:....:.|.||...:.:
 Worm    63 -----WVNSKYISTMQYWVYDYTNTIGIMNRAIYPDVREKGPYAFDEILTMDKLNFSENGEFMEF 122

  Fly   181 QHKKILQFVP---------------------ELSIDK-DTPIT------------------TPNI 205
            :..:...|.|                     ::.||: ||.|.                  .|| 
 Worm   123 RQIQTFVFNPNKSCAGCDPYKDKVLIPDMGFQVGIDQIDTVIEGILKNPLAATICHAIMKGKPN- 186

  Fly   206 PLLTLTSLSPKLGYLLSKTISVVVTAAQFKPFINVTAEQLAF-GY---------DDALVSLAHRF 260
                .......||.|:...:..:::.....||..||.:||.| ||         |:|| .:.|..
 Worm   187 ----ANQTCSNLGALIEGELGTLISLFNVSPFTTVTVDQLLFSGYKTPFVEKFLDEAL-GMLHFL 246

  Fly   261 YPKHMRPMERMGLLLG-RNGTLTEVSSVKTGMDSMDQFGYIDQLNGLDH---------------L 309
            :....:|::...:.|. .|||...:::|.||.....:.||:.:...:.:               .
 Worm   247 FGTAPKPLDDPPIQLNPLNGTSDIINTVLTGKTDPLKAGYMTEFRSISNNSLFNSIGNTLPPMWW 311

  Fly   310 PHWSEPPCTS------IAGSEGSFFPPRELTKSEVVHIYDKDLCRIIPLKYVESLEKDGIAADLF 368
            |:.::..|..      :.|:.|.:| ...:.|::::..:..|:||.|...:...:...|.....|
 Worm   312 PYANKTYCKDPNSALVLTGTNGDYF-KNFVKKTDILPAFVSDVCRTIHFVFDREVTVKGFKGYRF 375

  Fly   369 RLPNNSYGDSAHNPENKC----YDTSEYEPIQ------GLQNISPCQYGAPVYISNPHFFESHPD 423
            .:|...:..|.......|    |.:.|| |.|      ||.:||.|. |.|:.:|.|||:::...
 Worm   376 VMPPTQFDYSLDENCGYCIPLKYGSYEY-PAQSACLPSGLLDISQCT-GGPIIMSKPHFYQASKV 438

  Fly   424 LLNSVEGLKPEREKHETYFKIQPKLGVPLEGKVRIQLNLKVTRAKDVYPVRDFRDFVFPVMWLEE 488
            :...|...||..:..||...|:|..|..|:.:.|:|:|:.|.:.|.:......|...:|:.|:.|
 Worm   439 VSKFVPRFKPTYDNDETMLDIEPNTGTVLQAQKRLQINMLVNQFKHIRSYSVMRPGAYPLAWVNE 503

  Fly   489 G-------ISELTPAIKRWIYLGTVIAPSAVPIGSYLMILGGAFAII 528
            .       |.:|...:...:.....|...||.:|:.|:.|.....|:
 Worm   504 SFYMDQNTIDQLNSQLFTPVSTVNTICWIAVGLGAGLIALSIVMVIV 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsbNP_001097477.1 CD36 103..534 CDD:460076 113/533 (21%)
scav-1NP_508919.2 CD36 17..548 CDD:460076 117/548 (21%)

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