DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dsb and scav-3

DIOPT Version :9

Sequence 1:NP_001097477.1 Gene:dsb / 38252 FlyBaseID:FBgn0035290 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_499625.2 Gene:scav-3 / 176673 WormBaseID:WBGene00013039 Length:534 Species:Caenorhabditis elegans


Alignment Length:510 Identity:133/510 - (26%)
Similarity:231/510 - (45%) Gaps:71/510 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 AVIIIGIITLILGIILSSMPWLDYFILKNLRLWNDTLSY--------------HYWQRPGVIRLT 131
            :.||:|::....|::|.....:|..:.:.: :..|.|.|              ..|.:|......
 Worm    11 SAIILGLLLAAAGVLLLIGIPIDRIVNRQV-IDQDFLGYTRDENGTEVPNAMTKSWLKPLYAMQL 74

  Fly   132 KLYIYNVTNPDGFL-RGEKPHLQEVGPFVYREDMQKVNVKFHENNYTVSYQHKKILQFVPELSID 195
            .::::||||.||.| |.|||:|.|:||||:.|..:||..:|.:|:..|.|:::|:..|....|..
 Worm    75 NIWMFNVTNVDGILKRHEKPNLHEIGPFVFDEVQEKVYHRFADNDTRVFYKNQKLYHFNKNASCP 139

  Fly   196 K---DTPITTPNIPLLTL------TSLSPKLGYLLSKTISVVVTAAQFKPFINVTAEQLAF-GYD 250
            .   |..:|.|||....|      |....::.:.:...:.:|..|    |:|.|......| ||:
 Worm   140 TCHLDMKVTIPNIVFQKLIDAADVTIFGVRIKFAIESVLKMVSEA----PYITVKVSDALFDGYE 200

  Fly   251 DALVSLAHR-----FYPKHMRPMERMGLLLGRNGTLTEVSSVKTGMDSMDQFGYIDQLNGLDHLP 310
            |.::.:..:     |..:......|:|...|:|||...:..|..|:.|..:.|::...|.:..:|
 Worm   201 DPIIDIVCKNKILQFLCETNSLQRRVGFFYGQNGTTDGIYEVDAGVPSPSKIGHLYTWNNMTEMP 265

  Fly   311 H--WSEPPCTSIAGSEGSFFPPRELTKSEVVHIYDKDLCRIIPLKYVESLEKDGIAADLFRLPNN 373
            .  |.......|.|::|..|.|. |.:.:.:.|:...:||.|.::|.:.:..:|:.:..:..|.:
 Worm   266 EGTWDTKYARMINGTDGQLFSPM-LKREDRLTIFVPQICRSIQMEYTKDVAVNGVPSWRYAPPLD 329

  Fly   374 SYGDSAHNPENKCYDTSEYEP-------IQ-------GLQNISPCQYGAP-VYISNPHFFESHPD 423
            .|..:.  |:|:.:......|       :|       ||.::|.||.|.| ||:|||||:.|..:
 Worm   330 LYDPAL--PQNRAFCNKNGMPRYFDNTTVQIENCLPAGLIDLSRCQAGNPRVYLSNPHFYNSPME 392

  Fly   424 LLNSVEGLK-PEREKHETYFKIQPKLGVPLEGKVRIQLNLKVTRAKDVYPVRDFRDFVFPVMWLE 487
            |.:||.||. |......|...|:|..|||.:.|..:|:|:.:.:. .:....:..:.|.||:|:.
 Worm   393 LWHSVTGLSVPTASNDLTVVDIEPTAGVPTQAKRIMQINVGMVKG-SLSVTENTTNVVVPVLWMN 456

  Fly   488 E------GISELTPAI---KRWIYLGTVIAPSAVPIGSYLMILGGAFAIIFSFVR 533
            |      |..:....|   |.:.::|.||:.|   :|  |:.....|.:|..:.|
 Worm   457 ETAYFDQGTRDQLINIFNAKHYSFIGGVISLS---LG--LIAWLAVFVVIIVYSR 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsbNP_001097477.1 CD36 103..532 CDD:279474 127/485 (26%)
scav-3NP_499625.2 CD36 52..499 CDD:279474 121/459 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 168 1.000 Domainoid score I2304
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 171 1.000 Inparanoid score I2746
Isobase 1 0.950 - 0 Normalized mean entropy S5605
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 1 1.000 - - FOG0000618
OrthoInspector 1 1.000 - - mtm4750
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.930

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