DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmhs and lhfpl5a

DIOPT Version :10

Sequence 1:NP_647674.1 Gene:Tmhs / 38251 FlyBaseID:FBgn0262624 Length:265 Species:Drosophila melanogaster
Sequence 2:XP_017213895.1 Gene:lhfpl5a / 558325 ZFINID:ZDB-GENE-110131-8 Length:219 Species:Danio rerio


Alignment Length:212 Identity:81/212 - (38%)
Similarity:127/212 - (59%) Gaps:9/212 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGTKIEYVDTTHLYASKYIRNSKAIGVLWAIFTICYAIIGIVAFVTPEWIGDP-DNDGAGRLGLW 64
            |...:...:...:|.:.|:||::|:||||.|||||:||||:|.|:.|.||||. |...:|..||:
Zfish     1 MAKMLSAQEAAKIYHTNYVRNARAVGVLWTIFTICFAIIGMVVFIQPYWIGDSVDTPQSGYFGLF 65

  Fly    65 QQCQRDEIFDN--CRRRWESIFEVPTFSFQLATFFMLGAIALALLTIFFLVC---LLFMKSTRVF 124
            ..|..:.|...  |:........:|:.:|:.|.||:  .|:| ||.:..:||   ..|..|..|:
Zfish    66 HYCIGNPITGELVCKGSALDFGSIPSGAFKTAMFFV--GISL-LLIVGTIVCFSLFFFCNSGSVY 127

  Fly   125 HLCGWMQIISAICMIVACAAFPFGWNSDDFRKICGPEANRFELGLCGIRWAYPLAIIGCIDGVVL 189
            .:|.|||:.:|.||::.|..:|.||:|::.:::||...:::.||.|.:||||.||||..:|.:.|
Zfish   128 KICAWMQLAAATCMVIGCMIYPDGWDSEEVKRMCGQRTDKYTLGNCTVRWAYILAIISIMDSLTL 192

  Fly   190 ATLAFILATRHVRLQPD 206
            :.|||:|..|..:|.|:
Zfish   193 SFLAFVLGNRQDKLLPE 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TmhsNP_647674.1 L_HMGIC_fpl 25..199 CDD:463019 72/179 (40%)
lhfpl5aXP_017213895.1 L_HMGIC_fpl 25..202 CDD:463019 72/179 (40%)

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