DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmhs and lhfpl6

DIOPT Version :10

Sequence 1:NP_647674.1 Gene:Tmhs / 38251 FlyBaseID:FBgn0262624 Length:265 Species:Drosophila melanogaster
Sequence 2:XP_073769959.1 Gene:lhfpl6 / 494110 ZFINID:ZDB-GENE-041212-82 Length:213 Species:Danio rerio


Alignment Length:164 Identity:42/164 - (25%)
Similarity:77/164 - (46%) Gaps:23/164 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GVLWAIFTICYAIIGIVAFVTPEWI-----GDPDNDGAGRLGLWQQCQ---RDE------IFDNC 76
            ||:||:.:...|....|.|..|.|:     |.|.:     .|.:::|.   |||      :.:.|
Zfish     9 GVIWALLSFLCAATSCVGFFMPYWLLGSQMGKPVS-----FGTFRRCSYPIRDEARGGTVMLEQC 68

  Fly    77 RRRWESIFEVPTFSFQLATFFM---LGAIALALLTIFFLVCLLFMKSTRVFHLCGWMQIISAICM 138
             .|:.|...:|:..:::.|...   .|.:.|..||.....|:..:.|..:..:.|.:|.:..:.:
Zfish    69 -GRYASFQGIPSLEWRICTVVTGIGCGLLLLVALTAIMGCCVTDLISRTIGRVAGGIQFVGGLLI 132

  Fly   139 IVACAAFPFGWNSDDFRKICGPEANRFELGLCGI 172
            ...||.:|.||:|::.|:.|...:::|:||:.||
Zfish   133 GSGCALYPLGWDSEEVRQTCSNSSDQFDLGMFGI 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TmhsNP_647674.1 L_HMGIC_fpl 25..199 CDD:463019 42/164 (26%)
lhfpl6XP_073769959.1 None

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