DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmhs and Lhfpl3

DIOPT Version :10

Sequence 1:NP_647674.1 Gene:Tmhs / 38251 FlyBaseID:FBgn0262624 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_084266.1 Gene:Lhfpl3 / 269629 MGIID:1925076 Length:232 Species:Mus musculus


Alignment Length:233 Identity:91/233 - (39%)
Similarity:134/233 - (57%) Gaps:29/233 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 DTTHLYASKYIRNSKAIGVLWAIFTICYAIIGIVAFVTPEWIGD-PDNDGAGRLGLWQQCQRD-- 70
            :...||.:.|:|||:||||||||||||:||:.:|.|:.|.|||| .|...||..||:..|..:  
Mouse    16 EAAKLYHTNYVRNSRAIGVLWAIFTICFAIVNVVCFIQPYWIGDGVDTPQAGYFGLFHYCIGNGF 80

  Fly    71 --EIFDNCRRRWESIFEVPTFSFQLATFF-----MLGAIALALLTIFFLVCLLFMKSTRVFHLCG 128
              |:  .||..:.....:|:.:|:.|:||     ||....:...|:||     |..:..|:.:|.
Mouse    81 SREL--TCRGSFTDFSTLPSGAFKAASFFIGLSMMLIIACIVCFTLFF-----FCNTATVYKICA 138

  Fly   129 WMQIISAICMIVACAAFPFGWNSDDFRKICGPEANRFELGLCGIRWAYPLAIIGCIDGVVLATLA 193
            |||:.||.|:::.|..||.||:||:.:::||.:.:::.||.|.:||||.|||||.:|.::|:.||
Mouse   139 WMQLTSAACLVLGCMIFPDGWDSDEVKRMCGEKTDKYTLGACSVRWAYILAIIGILDALILSFLA 203

  Fly   194 FILATRHVRLQPDPIYQNSLYKGEI--NNAYLTDAISL 229
            |:|..|          |:||...|:  .|..|....||
Mouse   204 FVLGNR----------QDSLMAEELKAENKVLLSQYSL 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TmhsNP_647674.1 L_HMGIC_fpl 25..199 CDD:463019 75/183 (41%)
Lhfpl3NP_084266.1 L_HMGIC_fpl 32..209 CDD:463019 75/183 (41%)

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