DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tmhs and LHFPL6

DIOPT Version :10

Sequence 1:NP_647674.1 Gene:Tmhs / 38251 FlyBaseID:FBgn0262624 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_005771.1 Gene:LHFPL6 / 10186 HGNCID:6586 Length:200 Species:Homo sapiens


Alignment Length:190 Identity:52/190 - (27%)
Similarity:85/190 - (44%) Gaps:30/190 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GVLWAIFTICYAIIGIVAFVTPEW-----IGDPDNDGAGRLGLWQQCQ---RDE------IFDNC 76
            ||:||:.:...|....|.|..|.|     :|.|.:     .|.:::|.   .||      :.:.|
Human     9 GVIWALLSFLCAATSCVGFFMPYWLWGSQLGKPVS-----FGTFRRCSYPVHDESRQMMVMVEEC 68

  Fly    77 RRRWESIFEVPTFSFQLATFFM---LGAIALALLTIFFLVCLLFMKSTRVFHLCGWMQIISAICM 138
             .|:.|...:|:..:::.|...   .|.:.|..||.....|:..:.|..|..:.|.:|.:..:.:
Human    69 -GRYASFQGIPSAEWRICTIVTGLGCGLLLLVALTALMGCCVSDLISRTVGRVAGGIQFLGGLLI 132

  Fly   139 IVACAAFPFGWNSDDFRKICGPEANRFELGLCGIRWAYPLAIIGCIDGVVLATLAFILAT 198
            ...||.:|.||:|::.|:.||..:.:|:||.|.|.|||.....|       ||.|.:|.|
Human   133 GAGCALYPLGWDSEEVRQTCGYTSGQFDLGKCEIGWAYYCTGAG-------ATAAMLLCT 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TmhsNP_647674.1 L_HMGIC_fpl 25..199 CDD:463019 52/190 (27%)
LHFPL6NP_005771.1 L_HMGIC_fpl 8..193 CDD:463019 52/190 (27%)

Return to query results.
Submit another query.