DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rap1 and RAS2

DIOPT Version :9

Sequence 1:NP_001189023.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_014301.1 Gene:RAS2 / 855625 SGDID:S000005042 Length:322 Species:Saccharomyces cerevisiae


Alignment Length:182 Identity:101/182 - (55%)
Similarity:133/182 - (73%) Gaps:7/182 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREYKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFT 65
            :||||:||:|.|||||||||:|..|..||::|||||||||||||.:|.:..:|:||||||.|:::
Yeast     8 IREYKLVVVGGGGVGKSALTIQLTQSHFVDEYDPTIEDSYRKQVVIDDEVSILDILDTAGQEEYS 72

  Fly    66 AMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGNKCDLEEERVVGKEL 130
            |||:.||:||:||:||||||::|:.::|....:|||||||||.||:|:||||.|||.|:.|..:.
Yeast    73 AMREQYMRNGEGFLLVYSITSKSSLDELMTYYQQILRVKDTDYVPIVVVGNKSDLENEKQVSYQD 137

  Fly   131 GKNLATQFNCAFMETSAKAKVNVNDIFYDLVRQI-------NKKSPEKKQKK 175
            |.|:|.|.|..|:|||||..:||.:.||.|.|.:       ||...|....|
Yeast   138 GLNMAKQMNAPFLETSAKQAINVEEAFYTLARLVRDEGGKYNKTLTENDNSK 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_001189023.1 Rap1 3..165 CDD:133375 96/168 (57%)
RAS2NP_014301.1 small_GTPase 9..172 CDD:197466 97/162 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0395
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000092
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100217
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1068
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.740

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