DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rap1 and RHB1

DIOPT Version :9

Sequence 1:NP_001189023.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_009956.2 Gene:RHB1 / 850392 SGDID:S000000622 Length:209 Species:Saccharomyces cerevisiae


Alignment Length:174 Identity:59/174 - (33%)
Similarity:99/174 - (56%) Gaps:12/174 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRD 69
            ||.::|:..|||:.|||:||:..|||.|.||||:.:.:.:......|.||||||||.::.:.:..
Yeast    18 KIALIGARNVGKTTLTVRFVESRFVESYYPTIENEFTRIIPYKSHDCTLEILDTAGQDEVSLLNI 82

  Fly    70 LYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGNKCDLEE-----ERVVGKE 129
            ..:...:|.:|.|||..:::|:.:..|.::::.....|::|::|||.|.||..     :|.|.|.
Yeast    83 KSLTGVRGIILCYSIINRASFDLIPILWDKLVDQLGKDNLPVILVGTKADLGRSTKGVKRCVTKA 147

  Fly   130 LGKNLATQF-------NCAFMETSAKAKVNVNDIFYDLVRQINK 166
            .|:.||:..       ..||:|.||:...||.:.|..|::|:.:
Yeast   148 EGEKLASTIGSQDKRNQAAFIECSAELDYNVEETFMLLLKQMER 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_001189023.1 Rap1 3..165 CDD:133375 59/171 (35%)
RHB1NP_009956.2 RheB 16..209 CDD:206709 59/174 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0395
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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