DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rap1 and RERG

DIOPT Version :10

Sequence 1:NP_476857.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_116307.1 Gene:RERG / 85004 HGNCID:15980 Length:199 Species:Homo sapiens


Alignment Length:166 Identity:72/166 - (43%)
Similarity:108/166 - (65%) Gaps:2/166 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EYKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAM 67
            |.|:.:.|..|||||||.|:|:...|:.:||||:|.:||.|..:|.:...:|||||||.|. |..
Human     6 EVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQED-TIQ 69

  Fly    68 RDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGNKCDLEEERVVGKELGK 132
            |:.:|:.|:||||||.||.:.:|.::..|:..:..:|...:|.::|||||.||:..|.|..|.|:
Human    70 REGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADLDHSRQVSTEEGE 134

  Fly   133 NLATQFNCAFMETSA-KAKVNVNDIFYDLVRQINKK 167
            .|||:..|||.|.|| ..:.|:.:|||:|.|::.::
Human   135 KLATELACAFYECSACTGEGNITEIFYELCREVRRR 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_476857.1 Rap1 3..165 CDD:133375 72/162 (44%)
RERGNP_116307.1 RERG_RasL11_like 8..169 CDD:206713 71/161 (44%)

Return to query results.
Submit another query.