Protein Alignment Rap1 and RABA6a

DIOPT Version :9

• Sequence 1: NP_001189023.1
• Gene: Rap1 / 38244
• FlyBaseID: FBgn0004636
• Length: 184
• Species: Drosophila melanogaster
• Sequence 2: NP_177505.1
• Gene: RABA6a / 843698
• AraportID: AT1G73640
• Length: 233
• Species: Arabidopsis thaliana
• Alignment Length: 167
• Identity: 59/167 - (35%)
• Similarity: 94/167 - (56%)
• Gaps: 8/167 - (4%)

  Fly     4 YKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTI--EDSYRKQVEVDGQQCMLEILDTAGTEQFTA 66
            :|.|::|...||||.|..:|.:..|.....|||  |.:|| .|.|..:....:|.||||.|:|.|
plant    14 FKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYR-NVHVGDKIIKAQIWDTAGQERFRA 77

  Fly    67 MRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKD--TDDVPMVLVGNKCDLEEERVVGKE 129
            :...|.:...|.:|:|.||.::||:   ::::.:..::|  ..:..:||||||.||.:.|.|.::
plant    78 ITSSYYRGALGALLIYDITRRTTFD---NIKKWLFELRDFANPETVVVLVGNKSDLRQSREVEED 139

  Fly   130 LGKNLATQFNCAFMETSAKAKVNVNDIFYDLVRQINK 166
            .||.||......|:||||...|||.:.|..::.:|::
plant   140 EGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHE 176

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rap1	NP_001189023.1	Rap1	3..165	CDD:133375	58/164 (35%)
RABA6a	NP_177505.1	Rab11_like	11..175	CDD:206660	58/164 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000