DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rap1 and Rasl10a

DIOPT Version :10

Sequence 1:NP_476857.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_660251.1 Gene:Rasl10a / 75668 MGIID:1922918 Length:203 Species:Mus musculus


Alignment Length:176 Identity:57/176 - (32%)
Similarity:94/176 - (53%) Gaps:23/176 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDS---YRKQVEVDGQQCMLEIL--DTAG---- 60
            ::.|||:.||||:|:..||:...:.|::.||  ||   ||..|.:||....|.|.  |.||    
Mouse     6 RVAVLGAPGVGKTAIIRQFLFGDYPERHRPT--DSPCLYRPAVLLDGAVYDLSIRDGDVAGPGSS 68

  Fly    61 ---TEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQIL--RVKDTDDVPMVLVGNKCDL 120
               .|::...:|..:::...|||||.|.:..:|:.::.||::|.  |.....:.|:::||||.|.
Mouse    69 PRSLEEWPDPKDWSLQDTDAFVLVYDICSPDSFDYVKALRQRIAENRPAGAPEAPILVVGNKRDR 133

  Fly   121 EEERVVGKELGKNLAT----QFNCAFMETSAKAKVNVNDIFYDLVR 162
            :..|...:   :.|||    .:.|.::|.|||...:|..:|.:|:|
Mouse   134 QRLRFGPR---RALATLVRRGWRCGYLECSAKYNWHVLRLFRELLR 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_476857.1 Rap1 3..165 CDD:133375 57/176 (32%)
Rasl10aNP_660251.1 Small GTPase-like 1..203 57/176 (32%)
P-loop containing Nucleoside Triphosphate Hydrolases 5..203 CDD:476819 57/176 (32%)
Effector region 33..42 4/10 (40%)

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