DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rap1 and RALB

DIOPT Version :9

Sequence 1:NP_001189023.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_001356329.1 Gene:RALB / 5899 HGNCID:9840 Length:206 Species:Homo sapiens


Alignment Length:178 Identity:90/178 - (50%)
Similarity:130/178 - (73%) Gaps:2/178 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMR 68
            :|::::|||||||||||:||:...|||.|:||..|||||:|.:||::..::||||||.|.:.|:|
Human    15 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIR 79

  Fly    69 DLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVK-DTDDVPMVLVGNKCDLEEERVVGKELGK 132
            |.|.::|:||:||:|||...:|....:.|||||||| :.|.:|:::||||.||||.|.|..|..:
Human    80 DNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEERRQVPVEEAR 144

  Fly   133 NLATQFNCAFMETSAKAKVNVNDIFYDLVRQI-NKKSPEKKQKKPKKS 179
            :.|.::...::|||||.:.||:.:|:||:|:| .||..|.|.|..|||
Human   145 SKAEEWGVQYVETSAKTRANVDKVFFDLMREIRTKKMSENKDKNGKKS 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_001189023.1 Rap1 3..165 CDD:133375 82/162 (51%)
RALBNP_001356329.1 RalA_RalB 15..178 CDD:206710 82/162 (51%)
Effector region 43..51 4/7 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 180..206 7/13 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0395
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.