DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rap1 and RALA

DIOPT Version :10

Sequence 1:NP_476857.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_005393.2 Gene:RALA / 5898 HGNCID:9839 Length:206 Species:Homo sapiens


Alignment Length:192 Identity:96/192 - (50%)
Similarity:136/192 - (70%) Gaps:12/192 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMR 68
            :|::::|||||||||||:||:...|||.|:||..|||||:|.:||::..::||||||.|.:.|:|
Human    15 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIR 79

  Fly    69 DLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGNKCDLEEERVVGKELGKN 133
            |.|.::|:||:.|:|||...:|....|.||||||||:.::||.:|||||.|||::|.|..|..||
Human    80 DNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKRQVSVEEAKN 144

  Fly   134 LATQFNCAFMETSAKAKVNVNDIFYDLVRQINKK----SPEKKQKKPKKSL--------CVL 183
            .|.|:|..::|||||.:.||:.:|:||:|:|..:    |.||..||.:|||        |:|
Human   145 RAEQWNVNYVETSAKTRANVDKVFFDLMREIRARKMEDSKEKNGKKKRKSLAKRIRERCCIL 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_476857.1 Rap1 3..165 CDD:133375 85/160 (53%)
RALANP_005393.2 RalA_RalB 15..177 CDD:206710 86/161 (53%)
Effector region 43..51 4/7 (57%)

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