DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rap1 and rasd3

DIOPT Version :10

Sequence 1:NP_476857.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_001073403.1 Gene:rasd3 / 567084 ZFINID:ZDB-GENE-060818-9 Length:211 Species:Danio rerio


Alignment Length:202 Identity:67/202 - (33%)
Similarity:108/202 - (53%) Gaps:20/202 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 REYKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTA 66
            |..:.|.||:.||||:||..:|:|..|..||..|:|:.:..:.:.:|.:..:|||||:|:..|.|
Zfish     9 RTVRFVFLGAAGVGKTALITRFLQDRFDSKYTRTVEELHALEYDTEGARVRIEILDTSGSYSFPA 73

  Fly    67 MRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGNKCDL-EEERVVGKEL 130
            ||.|.::.|..|.|||:.....:..::|.|||:||.:|......:.::.||.|| ...|....|.
Zfish    74 MRALCIRTGDAFALVYAADEPDSLEEVQRLREEILELKGESFTGITVIENKADLCSRSRQATAEA 138

  Fly   131 GKNLATQFNCAFMETSAKAKVNVNDIFYDLVRQI---NKKSP--------------EKKQKKP-- 176
            .:.:...:...|:||||:...||..:|.||::|:   ::.||              ||::|.|  
Zfish   139 MRAVEEDWGAGFVETSARTGDNVTAVFRDLLQQMKLPSRVSPALRRRTQTMSRELTEKREKPPMK 203

  Fly   177 KKSLCVL 183
            |.:.|:|
Zfish   204 KNNSCIL 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_476857.1 Rap1 3..165 CDD:133375 57/165 (35%)
rasd3NP_001073403.1 P-loop containing Nucleoside Triphosphate Hydrolases 12..211 CDD:476819 66/199 (33%)

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