DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rap1 and rerglb

DIOPT Version :10

Sequence 1:NP_476857.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_001038581.2 Gene:rerglb / 566719 ZFINID:ZDB-GENE-040724-73 Length:203 Species:Danio rerio


Alignment Length:192 Identity:58/192 - (30%)
Similarity:105/192 - (54%) Gaps:8/192 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREYKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAG-TEQF 64
            |.:.|:.:|||.|.||||:.|:|:...|:.:|.......|.|::.:||:|..||:.|... :.:.
Zfish     1 MNDIKLALLGSEGAGKSAVLVRFLTKRFIGEYASNANSLYHKRLSIDGRQLNLEVFDPCSQSGES 65

  Fly    65 TAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQI---LRVKDTDDVPMVLVGNKCDLEEERVV 126
            ..:.:..:....|||:||:|:.:::|.:.:::..||   .|.....:||:.|||||.||...|.|
Zfish    66 RCILEEPVDWADGFVVVYTISDRTSFLNAKNILAQIKESRRETCKGEVPVCLVGNKQDLCHSRQV 130

  Fly   127 GKELGKNLATQFNCAFMETSAKAK-VNVNDIFYDLVRQIN---KKSPEKKQKKPKKSLCVLL 184
            .:|.|..|:.::.|.|.|.||... :.::::|..|:|.:.   |...::::....||:..|:
Zfish   131 SEEEGSVLSQEYKCLFQEVSAAENYLEISNLFTKLIRHVMEQLKHRGDRRRYSGSKSMAKLI 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_476857.1 Rap1 3..165 CDD:133375 53/166 (32%)
rerglbNP_001038581.2 None

Return to query results.
Submit another query.