DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rap1 and rasd4

DIOPT Version :10

Sequence 1:NP_476857.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_001007782.1 Gene:rasd4 / 553052 ZFINID:ZDB-GENE-050506-133 Length:208 Species:Danio rerio


Alignment Length:182 Identity:70/182 - (38%)
Similarity:110/182 - (60%) Gaps:7/182 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EYKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAM 67
            |.::|.:|:.||||:||..:|:|..|..|:..|:|:.:.|:.||.|.:..:.|:||:|:..|.||
Zfish    10 EVRLVFMGAAGVGKTALIKRFLQDSFEPKHRRTVEELHSKEYEVAGVKVTINIMDTSGSYSFPAM 74

  Fly    68 RDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGNKCD-LEEERVVGKELG 131
            |.|.::||..|.||||:....:...:..|||:||.||:....|:|:||||.| |.|.||...::.
Zfish    75 RKLSIQNGDAFALVYSVDDPESLEVVNRLREEILEVKEDKFTPIVVVGNKKDRLIERRVSADDVL 139

  Fly   132 KNLATQFNCAFMETSAKAKVNVNDIFYDLVRQIN---KKSPEKKQKK---PK 177
            ..:...:|..|||.|||...||.::|.:|::|.|   :.||..::::   ||
Zfish   140 AKVEMDWNNCFMEASAKENENVMEVFKELLQQANLPSRLSPALRRRRETFPK 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_476857.1 Rap1 3..165 CDD:133375 65/162 (40%)
rasd4NP_001007782.1 Ras_dva 12..208 CDD:206714 69/180 (38%)

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