DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rap1 and rras2

DIOPT Version :9

Sequence 1:NP_001189023.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_001017815.1 Gene:rras2 / 550513 ZFINID:ZDB-GENE-050417-352 Length:202 Species:Danio rerio


Alignment Length:186 Identity:97/186 - (52%)
Similarity:132/186 - (70%) Gaps:7/186 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EYKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAM 67
            :|::||:|.|||||||||:||:|..||..|||||||||.||..:|.:...|:||||||.|:|.||
Zfish    12 KYRLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDERPARLDILDTAGQEEFGAM 76

  Fly    68 RDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGNKCDLEEERVVGKELGK 132
            |:.||:.|:||:||:|:|.:.:|.::...:.|||||||.|:.||:|||||.|||::|.|.:|.|:
Zfish    77 REQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILVGNKADLEQQRQVTQEEGQ 141

  Fly   133 NLATQFNCAFMETSAKAKVNVNDIFYDLVRQINK-------KSPEKKQKKPKKSLC 181
            .||.|....:||.|||.::||:..|::|||.|.|       .|||..:|:..||.|
Zfish   142 QLARQLKVTYMEASAKIRMNVDQAFHELVRVIRKFQEQECPPSPEPTRKEKDKSGC 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_001189023.1 Rap1 3..165 CDD:133375 88/161 (55%)
rras2NP_001017815.1 M_R_Ras_like 11..174 CDD:133345 88/161 (55%)
RAS 25..176 CDD:214541 81/150 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0395
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000092
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100217
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1068
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.740

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