DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rap1 and Rit1

DIOPT Version :10

Sequence 1:NP_476857.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_001383470.1 Gene:Rit1 / 499652 RGDID:1559874 Length:219 Species:Rattus norvegicus


Alignment Length:184 Identity:94/184 - (51%)
Similarity:137/184 - (74%) Gaps:5/184 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 REYKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTA 66
            ||||:|:||:|||||||:|:||:...|.|.:||||||:|:.::.:|.:...|:||||||..:|||
  Rat    20 REYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTA 84

  Fly    67 MRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGNKCDLEEERVVGKELG 131
            |||.||:.|:||::.||||.:.:|:::::.::.|.||:.|||.|:||||||.||::.|.|.||.|
  Rat    85 MRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVSKEEG 149

  Fly   132 KNLATQFNCAFMETSAKAKVNVNDIFYDLVRQINKKSPE-----KKQKKPKKSL 180
            .:||.:|||.|.||||..:..::|:|:.|||:|.||..|     :|:.|||.|:
  Rat   150 LSLAREFNCPFFETSAAYRYYIDDVFHALVREIRKKEKELVLAMEKKAKPKSSV 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_476857.1 Rap1 3..165 CDD:133375 84/161 (52%)
Rit1NP_001383470.1 Rit_Rin_Ric 20..191 CDD:206712 89/170 (52%)

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