DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rap1 and rras

DIOPT Version :9

Sequence 1:NP_001189023.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_001005931.2 Gene:rras / 449660 ZFINID:ZDB-GENE-041010-217 Length:196 Species:Danio rerio


Alignment Length:194 Identity:98/194 - (50%)
Similarity:131/194 - (67%) Gaps:17/194 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMR 68
            ||:||:|.|||||||||:||:|..||..|||||||||.|...|||::..|:||||||.|:|.|||
Zfish     7 YKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICTVDGKETRLDILDTAGQEEFGAMR 71

  Fly    69 DLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGNKCDLEEERVVGKELGKN 133
            :.||::|:||:||:::....::|::|....|||||||.||.||||||||.||:::||:.||....
Zfish    72 EQYMRSGEGFLLVFALNDSGSYNEIQKFHTQILRVKDRDDFPMVLVGNKSDLDQQRVISKEEAMT 136

  Fly   134 LATQFNCAFMETSAKAKVNVNDIFYDLVRQINK----KSP------EKKQKK---PKKSLCVLL 184
            .|.:....:||:|||.:.||::.|.::||.|.|    :||      ..|||.   |    |.||
Zfish   137 FARENRIHYMESSAKNRHNVDEAFMEVVRAIRKFQETESPPLPANHTGKQKSGGCP----CTLL 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_001189023.1 Rap1 3..165 CDD:133375 87/160 (54%)
rrasNP_001005931.2 M_R_Ras_like 5..168 CDD:133345 87/160 (54%)
small_GTPase 19..170 CDD:197466 79/150 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0395
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000092
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1068
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.840

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