DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rap1 and ralba

DIOPT Version :10

Sequence 1:NP_476857.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_001003649.1 Gene:ralba / 445255 ZFINID:ZDB-GENE-040801-267 Length:207 Species:Danio rerio


Alignment Length:193 Identity:90/193 - (46%)
Similarity:131/193 - (67%) Gaps:12/193 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMR 68
            :|::::|||||||||||:||:...|||.|:||..|||||:|.:||::..::||||||.|.:.|:|
Zfish    15 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIR 79

  Fly    69 DLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVK-DTDDVPMVLVGNKCDLEEERVVGKELGK 132
            |.|.::|:||:||:|||...:|....:.|||||||| :.|.:|::|||||.|||:.|.|..:..:
Zfish    80 DNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLLVGNKSDLEDRRQVSVDEAR 144

  Fly   133 NLATQFNCAFMETSAKAKVNVNDIFYDLVRQI-----------NKKSPEKKQKKPKKSLCVLL 184
            ..|.::...::|||||.:.||:.:|:||:|::           |.|...||.||..|..|.||
Zfish   145 GKAEEWAVQYVETSAKTRANVDKVFFDLMREVRAKKMSENKDKNGKGKNKKNKKSFKERCCLL 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_476857.1 Rap1 3..165 CDD:133375 80/172 (47%)
ralbaNP_001003649.1 RalA_RalB 15..178 CDD:206710 80/162 (49%)

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