DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rap1 and ralbb

DIOPT Version :10

Sequence 1:NP_476857.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_001002123.1 Gene:ralbb / 415213 ZFINID:ZDB-GENE-040625-121 Length:206 Species:Danio rerio


Alignment Length:192 Identity:93/192 - (48%)
Similarity:137/192 - (71%) Gaps:11/192 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMR 68
            :|::::|||||||||||:||:...|||.|:||..|||||:|.:||::..::||||||.|.:.|:|
Zfish    15 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIR 79

  Fly    69 DLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVK-DTDDVPMVLVGNKCDLEEERVVGKELGK 132
            |.|.::|:||:||:|||...:|:...:.|||||||| :.|.:|:::||||.||||.|.|..:..:
Zfish    80 DNYFRSGEGFLLVFSITEPESFSASAEFREQILRVKAEEDKIPLLVVGNKSDLEERRQVSADEAR 144

  Fly   133 NLATQFNCAFMETSAKAKVNVNDIFYDLVRQI-NKKSPEKKQK------KPKKSL---CVLL 184
            :.|.::...::|||||.:.||:.:|:||:|:: .||..|.|:|      |.||||   |.||
Zfish   145 SKADEWGVQYVETSAKTRANVDKVFFDLMREVRTKKMSENKEKNLKKGGKKKKSLKERCTLL 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_476857.1 Rap1 3..165 CDD:133375 80/162 (49%)
ralbbNP_001002123.1 RalA_RalB 15..178 CDD:206710 80/162 (49%)

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